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GrainGenes Marker Report: Xbcd161-2A

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Locus
Xbcd161-2A
Type
RFLP
Chromosome
2A
Chromosome Arm
2A
2AS
Map
Ta-Synthetic/Opata-2A119.1
Ta-Synthetic/Opata-BARC-2A76.5
Ta-Synthetic/Opata-DR-2A-7.6
Ta-Synthetic/Opata-GPW-2A106.3
[ Show Nearby Loci ]
Map Data
Wheat, Synthetic x Opata  [ GBrowser ]
Wheat, Synthetic x Opata, BARC
Wheat, Synthetic x Opata, DR Genes
Wheat, Synthetic x Opata, GPW
Probe
BCD161
Homology
AC027656_19e-value: 8e-39(AC027656) Strong similarity to a hypothetical protein F13M23.30 gi|7485455 from Arabidopsis thaliana BAC F13M23 gb|AL035523. It contains a purple acid phosphatase domain PF|02227.
NP_005422.1e-value: 8.7X-ray repair cross complementing protein 2; X-ray repair, complementing defective, repair in Chinese hamster; DNA repair protein XRCC2 [Homo sapiens] sapiens]
Image
BCD161 SO autoradiogram
Possible Orthologs
Xbcd161a
Xbcd161b



Probe for Locus
BCD161
Locus
Xbcd161-2A
Xbcd161a
Xbcd161b
Synonym
SynonymHAR35_14511
HAR35_14519
HAR35_31858
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Lambda ZAP II library
Type
cDNA
Sequence
BE438956
BE438963
BCD161_WHE04H11.s1
Polymorphism
BCD161 HindIII
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
PCR size
2
Clone Vector
pBluSK
Excision Enzyme
EcoRI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 78 sec, 50 C 78 sec, 72 C 120 sec, 25 times; 94 C for 78 sec, 50 C 78 sec, 72 C 5 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
BCD161 SO autoradiogram
Data Source
Sorrells, Mark E.96.07