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GrainGenes Marker Report: Xbcd197-5D

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Locus
Xbcd197-5D
Type
RFLP
Chromosome
5D
Chromosome Arm
5DL
Map
Ta-Synthetic/Opata-5D191.4
Ta-Synthetic/Opata-BARC-5D166.4
Ta-Synthetic/Opata-GPW-5D206
Ta-Synthetic/Opata-SSR-5D189.8
Ta-Synthetic/Opata-SSR_D-5D210.3
[ Show Nearby Loci ]
Map Data
Wheat, Synthetic x Opata  [ GBrowser ]
Wheat, Synthetic x Opata, BARC
Wheat, Synthetic x Opata, GPW
Wheat, Synthetic x Opata, SSR
Wheat, Synthetic x Opata, SSR-D
Probe
BCD197
Homology
AF370148_1e-value: 4e-08(AF370148) unknown protein [Arabidopsis thaliana]
CAB46848.1e-value: 5.3(AJ388549) hypothetical protein [Canis familiaris]
Image
BCD197 SO autoradiogram
Possible Orthologs
BCD197
Xbcd197
bcd197



Probe for Locus
BCD197
Locus
Xbcd197-5D
[ Show all 9 ]
Synonym
SynonymHAR35_16239
HAR35_43304
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Lambda ZAP II library
Type
cDNA
Sequence
BE438957
BE438964
BCD197_WHE04H12.s1
Polymorphism
BCD197 XbaI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
PCR size
0.8
Clone Vector
pBluSK
Excision Enzyme
EcoRI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 78 sec, 50 C 78 sec, 72 C 120 sec, 25 times; 94 C for 78 sec, 50 C 78 sec, 72 C 5 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
BCD197 SO autoradiogram
Data Source
Sorrells, Mark E.96.07

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