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GrainGenes Marker Report: Xbcd961

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Locus
Xbcd961
Type
RFLP
Map
Avena-Sorrells-E10.4
Oat-KxO-2612.4
Oat-KxO/AFLP-24-26126
Oat-KxO/Q-2612.4
[ Show Nearby Loci ]
QTL with Locus Marker
Test weight, KxO-26-b
Test weight, KxO-26-c
Yield, KxO-26
Map Data
Diploid Oat, Cornell2
Oat, KxO
Oat, KxO, AFLP
Oat, KxO/QTL
Probe
BCD961
Homology
T06177e-value: 3e-45ribulose-bisphosphate carboxylase activase (EC 6.3.4.-) A1 - barley vulgare]
RCAA_HORVUe-value: 2e-24RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE A, CHLOROPLAST PRECURSOR (RUBISCO ACTIVASE A) (RA A) vulgare]
B23703e-value: 6e-17ribulose-bisphosphate carboxylase activase (EC 6.3.4.-) A long form precursor - barley (fragment) vulgare]
Image
BCD961 KO autoradiogram
Reference
ReferenceJin H et al. (2000) Combined AFLP and RFLP mapping in two hexaploid oat recombinant inbred populations Genome 94-101.
Possible Orthologs
bcd961
BCD961



Probe for Locus
BCD961
Locus
Xbcd961
bcd961
BCD961
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Lambda ZAP II library
Type
cDNA
Sequence
BE438631
BE438681
BE438772
BCD961_WHE1F0081
BCD961_WHE1F0082
Polymorphism
BCD961 EcoRI
BCD961 EcoRV
BCD961 DraI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
PCR size
2
Clone Vector
pBluSK
Excision Enzyme
EcoRI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 78 sec, 50 C 78 sec, 72 C 120 sec, 25 times; 94 C for 78 sec, 50 C 78 sec, 72 C 5 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
BCD961 KO autoradiogram
Data Source
Sorrells, Mark E.96.07