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GrainGenes Marker Report: Xcdo127

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Locus
Xcdo127
Type
RFLP
Chromosome
1B
Map
Avena-Sorrells-F59.8
Wheat-Composite2004-1B51
[ Show Nearby Loci ]
Map Data
Diploid Oat, Cornell2
Wheat, Composite, 2004
Probe
CDO127
Homology
AF367255_1e-value: 1e-04(AF367255) AT3g52990/F8J2_160 [Arabidopsis thaliana]
Possible Orthologs
CDO127a
[ Show all 7 ]



Probe for Locus
CDO127
Locus
CDO127a
[ Show all 11 ]
Synonym
SynonymHAR35_15126
HAR35_15127
HAR35_42126
Reference
ReferenceAnderson JA et al. (1992) Development of a chromosomal arm map for wheat based on RFLP markers. Theoretical and Applied Genetics 83:1035-1043.
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
BE439125
CDO127_WHE2C0091
CDO127_WHE2C0092
AA231695
AA231696
Polymorphism
CDO127 XbaI
Source Species
Avena sativa
Source Germplasm
Brooks CIav9260
Source Tissue
etiolated leaf
PCR size
1.2
Clone Vector
pBluSK
Excision Enzyme
EcoRI
XhoI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 60 sec, 50 C 40 sec, 72 C 60 sec, 34 times; 94 C for 60 sec, 50 C 40 sec, 72 C 10 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
CDO127 SO autoradiogram
Data Source
Sorrells, Mark E.96.07