Query (optional)   in Class  

GrainGenes Marker Report: Xcdo1281

[Submit comment/correction]

Locus
Xcdo1281
Type
RFLP
Map
Avena-Sorrells-G52.2
Oat-2001-KxO_11-413.75
Oat-KxO-1110.3
Oat-KxO/AFLP-1124
Oat-KxO/Q-1110.3
[ Show Nearby Loci ]
Map Data
Diploid Oat, Cornell2
Oat, KxO
Oat, KxO, AFLP
Oat, KxO/QTL
Oat-2001-KxO
Probe
CDO1281
Homology
AC079730_16e-value: 2e-53(AC079730) hypothetical protein; 20269-18101 [Arabidopsis thaliana] thaliana]
Image
CDO1281 KO autoradiogram
Reference
ReferenceJin H et al. (2000) Combined AFLP and RFLP mapping in two hexaploid oat recombinant inbred populations Genome 94-101.
Possible Orthologs
cdo1281
Xcdo1281-2A
Xcdo1281a
Xcdo1281b
CDO1281



Probe for Locus
CDO1281
Locus
Xcdo1281-2A
[ Show all 6 ]
Synonym
SynonymHAR35_2112
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
BE439222
CDO1281_WHE03C07.r1
CDO1281_WHE03C07.s1
CDO1281-3
Polymorphism
CDO1281 EcoRI
CDO1281 HindIII
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
PCR size
1.2
Clone Vector
pBluSK
Excision Enzyme
EcoRI
XhoI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 60 sec, 50 C 40 sec, 72 C 60 sec, 34 times; 94 C for 60 sec, 50 C 40 sec, 72 C 10 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
CDO1281 KO autoradiogram
CDO1281 SO autoradiogram
Data Source
Sorrells, Mark E.96.07

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.