Query (optional)   in Class  

GrainGenes Marker Report: Xcdo1479

[ Printable Version ]  [ Submit comment/correction ]

Locus
Xcdo1479
Type
RFLP
Chromosome
2D
Map
Avena-Sorrells-C25.2
Wheat-Composite2004-2D33
[ Show Nearby Loci ]
Map Data
Diploid Oat, Cornell2
Wheat, Composite, 2004
Probe
CDO1479
Homology
CAA64762.1e-value: 4.6(X95509) legumin-like protein [Asarum europaeum]
AF305499_1e-value: 0.47(AF305499) Otx [Ciona intestinalis]
Possible Orthologs
cdo1479ri
Xcdo1479-2D
CDO1479RI
cdo1479



Probe for Locus
CDO1479
Locus
Xcdo1479-2D
Xcdo1479
cdo1479ri
cdo1479
CDO1479RI
Synonym
SynonymHAR35_3985
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
BE439165
[ Show all 6 ]
Polymorphism
CDO1479 EcoRI
CDO1479 EcoRV
CDO1479 DraI
CDO1479 XbaI
Source Species
Avena sativa
Source Germplasm
Brooks CIav9260
Source Tissue
etiolated leaf
PCR size
2.5
Clone Vector
pBluSK
Excision Enzyme
EcoRI
XhoI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 60 sec, 50 C 40 sec, 72 C 60 sec, 34 times; 94 C for 60 sec, 50 C 40 sec, 72 C 10 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
CDO1479 SO autoradiogram
CDO1479 SO autoradiogram #2
Data Source
Sorrells, Mark E.96.07