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GrainGenes Marker Report: Xcdo244

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Locus
Xcdo244
Type
RFLP
Chromosome
6R
Chromosome Arm
6RL
Map
Avena-Sorrells-B24.9
Rye-2009-Consensus-6R113.2
Secale-UxE-6114
[ Show Nearby Loci ]
Map Data
Diploid Oat, Cornell2
Rye, UC90 x E-line
Rye_2009_consensus
Probe
CDO244
Homology
CAB51836.1e-value: 5.0(AJ243961) Putitive Ser/Thr protein kinase [Oryza sativa]
CAB51836.1e-value: 4e-18(AJ243961) Putitive Ser/Thr protein kinase [Oryza sativa]
Possible Orthologs
cdo244
CDO244



Probe for Locus
CDO244
Locus
cdo244
Xcdo244
CDO244
Synonym
SynonymHAR35_21905
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
BE439058
[ Show all 6 ]
Polymorphism
CDO244 EcoRI
Source Species
Avena sativa
Source Germplasm
Brooks CIav9260
Source Tissue
etiolated leaf
PCR size
1.6
Clone Vector
pBluSK
Excision Enzyme
EcoRI
XhoI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 60 sec, 50 C 40 sec, 72 C 60 sec, 34 times; 94 C for 60 sec, 50 C 40 sec, 72 C 10 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
CDO244 BROWS autoradiogram
Data Source
Sorrells, Mark E.96.07