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GrainGenes Marker Report: Xcdo29-6A

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Locus
Xcdo29-6A
Type
RFLP
Chromosome
6A
Chromosome Arm
6AS
Map
Ta-Synthetic/Opata-6A-3.5
Ta-Synthetic/Opata-BARC-6A56.8
Ta-Synthetic/Opata-DR-6A-2.6
Ta-Synthetic/Opata-GPW-6A68.5
[ Show Nearby Loci ]
QTL with Locus Marker
QHt.ipk-6A
Map Data
Wheat, Synthetic x Opata  [ GBrowser ]
Wheat, Synthetic x Opata, BARC
Wheat, Synthetic x Opata, DR Genes
Wheat, Synthetic x Opata, GPW
Probe
CDO29
Homology
CAA98155.1e-value: 3.9(Z73914) ORF378 protein [Pseudomonas stutzeri]
T02627e-value: 6e-20hypothetical protein T19L18.23 - Arabidopsis thaliana
Image
CDO29 SO autoradiogram
Possible Orthologs
Xcdo29
Xsts-cdo29
cdo29
cdo29-6A



Probe for Locus
CDO29
Locus
Xcdo29-6A
[ Show all 8 ]
Synonym
SynonymHAR35_17016
HAR35_43011
HAR35_43860
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
BE439339
BE439370
CDO29_WHE05G12.s1
Polymorphism
CDO29 EcoRI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
PCR size
1.7
Clone Vector
pBluSK
Excision Enzyme
EcoRI
XhoI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 60 sec, 50 C 40 sec, 72 C 60 sec, 34 times; 94 C for 60 sec, 50 C 40 sec, 72 C 10 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
CDO29 SO autoradiogram
Data Source
Sorrells, Mark E.96.07

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