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GrainGenes Marker Report: Xcdo312

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Locus
Xcdo312
Type
RFLP
Chromosome
1A
Chromosome Arm
1AL
Map
Avena-Sorrells-A52.8
TmTa-Dubcovsky-1A24.5
Wheat-Composite2004-1A57
[ Show Nearby Loci ]
Map Data
Diploid Oat, Cornell2
Triticum, CS-G1777 DS1A^m^(1A) RSL
Wheat, Composite, 2004
Probe
CDO312
Homology
AAK39330.1e-value: 4.5(AC024781) Hypothetical protein Y43H11AL.3 [Caenorhabditis elegans]
Possible Orthologs
CDO312
[ Show all 12 ]



Probe for Locus
CDO312
Locus
Xcdo312-1
[ Show all 13 ]
Synonym
SynonymHAR35_13122
HAR35_6430
HAR35_8530
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
BE439260
CDO312_WHE04F03.s1
CDO312-5
CDO312-3
Polymorphism
CDO312 EcoRI
CDO312 XbaI
Source Species
Avena sativa
Source Germplasm
Brooks CIav9260
Source Tissue
etiolated leaf
PCR size
1.7
Clone Vector
pBluSK
Excision Enzyme
EcoRI
XhoI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 60 sec, 50 C 40 sec, 72 C 60 sec, 34 times; 94 C for 60 sec, 50 C 40 sec, 72 C 10 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
CDO312 SO autoradiogram
Data Source
Sorrells, Mark E.96.07