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GrainGenes Marker Report: Xcdo337

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Locus
Xcdo337
Type
RFLP
Map
Avena-Sorrells-E39.1
[ Show Nearby Loci ]
Map Data
Diploid Oat, Cornell2
Probe
CDO337
Homology
AAD17761.1e-value: 6.3(AF082394) envelope glycoprotein [Human immunodeficiency virus type 1]
Possible Orthologs
CDO337
cdo337x



Probe for Locus
CDO337
Locus
CDO337
Xcdo337
cdo337x
Reference
ReferenceWight CP et al. (2004) Discovery, localization, and sequence characterization of molecular markers for the crown rust resistance genes Pc38, Pc39, and Pc48 in cultivated oat (Avena sativa L.) Molecular Breeding 14:349-361.
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
BE439128
CDO337_WHE2D0111
CDO337_WHE2D0112
CN180776
AI978366
Source Species
Avena sativa
Source Germplasm
Brooks CIav9260
Source Tissue
etiolated leaf
PCR size
1.1
Clone Vector
pBluSK
Excision Enzyme
EcoRI
XhoI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 60 sec, 50 C 40 sec, 72 C 60 sec, 34 times; 94 C for 60 sec, 50 C 40 sec, 72 C 10 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Data Source
Sorrells, Mark E.96.07