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GrainGenes Marker Report: Xcdo346B

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Locus
Xcdo346B
Type
RFLP
Map
Oat-KxO-113
Oat-KxO/Q-113
[ Show Nearby Loci ]
QTL with Locus Marker
BYDV, KxO-1
Map Data
Oat, KxO
Oat, KxO/QTL
Probe
CDO346
Homology
CAB64744.1e-value: 0.77(AJ270304) putative beta-galactosidase [Arabidopsis thaliana]
Image
CDO346 KO autoradiogram
Possible Orthologs
CDO346
[ Show all 16 ]



Probe for Locus
CDO346
Locus
CDO346b
[ Show all 21 ]
Synonym
SynonymHAR35_17123
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
BE439085
CDO346_WHE2E0021
CDO346_WHE2E0022
CDO346-5
CDO346-3
Polymorphism
CDO346 EcoRI
CDO346 EcoRV
CDO346 DraI
CDO346 HindIII
CDO346 XbaI
Source Species
Avena sativa
Source Germplasm
Brooks CIav9260
Source Tissue
etiolated leaf
PCR size
1.4
Clone Vector
pBluSK
Excision Enzyme
EcoRI
XhoI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 60 sec, 50 C 40 sec, 72 C 60 sec, 34 times; 94 C for 60 sec, 50 C 40 sec, 72 C 10 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
CDO346 KO autoradiogram
CDO346 SO autoradiogram
Data Source
Sorrells, Mark E.96.07