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GrainGenes Marker Report: Xcdo36-2B

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Locus
Xcdo36-2B
Type
RFLP
Chromosome
2B
Chromosome Arm
2BL
Map
Ta-Synthetic/Opata-2B171.6
Ta-Synthetic/Opata-DR-2B106.8
Ta-Synthetic/Opata-GPW-2B149.3
Ta-Synthetic/Opata-SSR-2B215.5
Tturgidum-JKxC-2B224
[ Show Nearby Loci ]
Map Data
T. turgidum, JK x Cham1
[ Show all 6 ]
Probe
CDO36
Possible Orthologs
CDO036
[ Show all 22 ]



Probe for Locus
CDO36
Locus
CDO36b
[ Show all 23 ]
Synonym
SynonymHAR35_21104
HAR35_6860
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
OatUni-ZAPXR [c]
OatUni-ZAPXR
Type
cDNA
STS
PCR primers
TCAAGCGAACCATCAGCGT
AGCCCTCGCCTAGCTCAG
Sequence
AA231751
AA231907
CDO36-5
Polymorphism
CDO36 EcoRI
Linkage Group
[b 1S]
Insert Enzyme
EcoRI
XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.1
PCR size
1.1
Clone Vector
pBluSK
BS-SK-
Excision Enzyme
EcoRI
XhoI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 60 sec, 50 C 40 sec, 72 C 60 sec, 34 times; 94 C for 60 sec, 50 C 40 sec, 72 C 10 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Blake, Tom
Image
CDO36 BROWS autoradiogram
Data Source
Sorrells, Mark E.96.07
Blake, Tom95.08.24
ATMI92.09

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