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GrainGenes Marker Report: Xcdo516B

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Locus
Xcdo516B
Type
RFLP
Map
Avena-Sorrells-G80.8
[ Show Nearby Loci ]
Map Data
Diploid Oat, Cornell2
Probe
CDO516
Homology
2009316Ae-value: 1.9endo-1,4-beta-glucanase [Clostridium josui]
NP_077435.1e-value: 1.2capsid protein [Cercopithecine herpesvirus 7]
Possible Orthologs
CDO516
[ Show all 8 ]



Probe for Locus
CDO516
Locus
Xcdo516-6A
[ Show all 9 ]
Synonym
SynonymHAR35_18738
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
BE439082
[ Show all 9 ]
Source Species
Avena sativa
Source Germplasm
Brooks CIav9260
Source Tissue
etiolated leaf
PCR size
1.7
Clone Vector
pBluSK
Excision Enzyme
EcoRI
XhoI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 60 sec, 50 C 40 sec, 72 C 60 sec, 34 times; 94 C for 60 sec, 50 C 40 sec, 72 C 10 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Data Source
Sorrells, Mark E.96.07