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GrainGenes Marker Report: Xcdo665-4A

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Locus
Xcdo665-4A
Type
RFLP
Chromosome
4A
Chromosome Arm
4AL
Map
Ta-Synthetic/Opata-4A96.4
Ta-Synthetic/Opata-BARC-4A70.3
Ta-Synthetic/Opata-GPW-4A113.7
[ Show Nearby Loci ]
Map Data
Wheat, Synthetic x Opata  [ GBrowser ]
Wheat, Synthetic x Opata, BARC
Wheat, Synthetic x Opata, GPW
Probe
CDO665
Homology
AC009525_23e-value: 2e-22(AC009525) Putative ribosomal protein L19 [Arabidopsis thaliana]
Possible Orthologs
CDO665
[ Show all 23 ]



Probe for Locus
CDO665
Locus
CDO665
[ Show all 29 ]
Synonym
Other nameCD0665
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
OatUni-ZAPXR [c]
OatUni-ZAPXR
Type
cDNA
Sequence
BE439169
BE439238
CDO665_WHE03A09.r1
CDO665_WHE03A09.s1
Polymorphism
CDO665 EcoRI
CDO665 XbaI
CDO665 EcoRV
CDO665 DraI
Linkage Group
2S [b 2S]
2S [b 2S]
Insert Enzyme
EcoRI
XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.2
PCR size
1.2
Clone Vector
pBluSK
BS-SK-
Excision Enzyme
EcoRI
XhoI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 60 sec, 50 C 40 sec, 72 C 60 sec, 34 times; 94 C for 60 sec, 50 C 40 sec, 72 C 10 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
CDO665 BROWS autoradiogram
CDO665 KO autoradiogram
Data Source
Sorrells, Mark E.96.07
Sorrells, Mark E.94.10.31
ATMI92.09

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