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GrainGenes Marker Report: Xcdo780-4A

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Locus
Xcdo780-4A
Type
RFLP
Synonym
Other nameXcnlCDO780-4A
ReferenceMcIntosh RA et al. (1995) Catalogue of gene symbols for wheat. Proceedings of the 8th International Wheat Genetics Symposium 1333-1500.
Chromosome
4A
Chromosome Arm
4AL
Map
Ta-Synthetic/Opata-4A75.6
Ta-Synthetic/Opata-BARC-4A61.9
Ta-Synthetic/Opata-GPW-4A99
[ Show Nearby Loci ]
Map Data
Wheat, Synthetic x Opata  [ GBrowser ]
Wheat, Synthetic x Opata, BARC
Wheat, Synthetic x Opata, GPW
Species
Triticum aestivum
Probe
CDO780
Homology
AAC51060.1e-value: 7.7(U80145) immunoglobulin heavy chain variable region [Homo sapiens]
Reference
ReferenceAnderson JA et al. (1992) Development of a chromosomal arm map for wheat based on RFLP markers. Theoretical and Applied Genetics 83:1035-1043.
Possible Orthologs
CDO780
[ Show all 11 ]



Probe for Locus
CDO780
Locus
Xcdo780
[ Show all 12 ]
Synonym
SynonymHAR35_26002
HAR35_4672
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
OatUni-ZAPXR [c]
Type
cDNA
Sequence
BE439174
BE439244
CDO780_WHE03B11.r1
CDO780_WHE03B11.s1
Polymorphism
CDO780 EcoRI
CDO780 EcoRV
CDO780 DraI
Linkage Group
4AL, 7AS, 7DS
Insert Enzyme
EcoRI
XhoI
Source Species
Avena sativa
Source Germplasm
Brooks CIav9260
Source Tissue
etiolated leaf
Insert Size
1.8
PCR size
1.8
Clone Vector
pBluSK
Excision Enzyme
EcoRI
XhoI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 60 sec, 50 C 40 sec, 72 C 60 sec, 34 times; 94 C for 60 sec, 50 C 40 sec, 72 C 10 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
CDO780 KO autoradiogram
CDO780 SO autoradiogram
Data Source
Sorrells, Mark E.96.07
ATMI92.09