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GrainGenes Marker Report: Xcdo82

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Locus
Xcdo82
Type
RFLP
Map
Avena-Sorrells-A50.6
[ Show all 10 ]
[ Show Nearby Loci ]
QTL with Locus Marker
Days to heading, KxO-6-a
Qbgl.KxO-Bgl_6
Map Data
Diploid Oat, Cornell2
[ Show all 10 ]
Probe
CDO82
Homology
AC084218_9e-value: 1e-09(AC084218) similar to Arabidopsis thaliana putative chloroplast outer envelope 86-like protein (AC002330) [Oryza sativa]
Image
CDO82 KO autoradiogram
Reference
ReferenceJin H et al. (2000) Combined AFLP and RFLP mapping in two hexaploid oat recombinant inbred populations Genome 94-101.
Possible Orthologs
cdo82
CDO82
cdo82a
cdo82b



Probe for Locus
CDO82
Locus
Xcdo82
cdo82
CDO82
cdo82a
cdo82b
Synonym
SynonymHAR35_1156
HAR35_50645
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
BE439123
CDO82_WHE2B0101
CDO82_WHE2B0102
CDO82-5
CDO82-3
Polymorphism
CDO82 EcoRI
CDO82 EcoRV
CDO82 DraI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
PCR size
1.4
Clone Vector
pBluSK
Excision Enzyme
EcoRI
XhoI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 60 sec, 50 C 40 sec, 72 C 60 sec, 34 times; 94 C for 60 sec, 50 C 40 sec, 72 C 10 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
CDO82 KO autoradiogram
Data Source
Sorrells, Mark E.96.07

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