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GrainGenes Marker Report: Xcfd86b

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Locus
Xcfd86b
Type
Microsatellite
Chromosome
5B
Map
Wheat-Composite2004-5B121
[ Show Nearby Loci ]
Map Data
Wheat, Composite, 2004
Probe
CFD86
Possible Orthologs
Xcfd86
[ Show all 9 ]



Probe for Locus
CFD86
Locus
Xcfd86-5D
[ Show all 10 ]
Reference
ReferenceGuyomarc'h H et al. (2002) Characterisation of polymorphic microsatellite markers from Aegilops tauschii and transferability to the D-genome of bread wheat Theoretical and Applied Genetics 104:1164-1172.
General Remarks
Quality Score = B
Quality scores reflect the quality of amplification (from A very good quality to D multiple banding pattern : A and B can be used on capillary systems)
Amplifies motif: GT
Regularity of motif is perfect
Type
PCR
SSR
PCR primers
Forward 5' TTAATGAGCGTCAGTACTCCC 3'
Reverse 5' GCAACCATGTTTAAGCCGAT 3'
SSR size
274
Amplification Conditions
5 minutes at 94 degrees; 30 cycles (94 degrees for 30 seconds; 60 degrees for 30 seconds; 72 degrees for 30 seconds); 10 minutes at 72 degrees
Linkage Group
5D/5B
Source Species
Aegilops tauschii
Data Source
Sourdille, Pierre

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