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GrainGenes Marker Report: Xgwm413-1B

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Locus
Xgwm413-1B
Type
Microsatellite
Chromosome
1B
Chromosome Arm
1BS
Map
Chinese_Spring_Deletion_SSR_1B-0.25
[ Show all 9 ]
[ Show Nearby Loci ]
Breakpoint Interval
C-1BS10-0.50
Map Data
Durum wheat, Kofa x UC1113
[ Show all 9 ]
2 Point Data
Yr15/Xgwm413
Probe
WMS413
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source
Roeder, Marion S.98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-1B, the interval most likely to contain locus is between Xbcd1124 and Xcdo1173
Possible Orthologs
Xgwm413
[ Show all 7 ]



Probe for Locus
WMS413
Locus
Xgwm413-1B
[ Show all 9 ]
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (GA)18
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR
SSR
PCR primers
5' TGCTTGTCTAGATTGCTTGGG 3'
5' GATCGTCTCGTCCTTGGCA 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 60 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS413
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
Data Source
Roeder, Marion S.98.09.15

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