GrainGenes Marker Report: Xgwm46-7B

Somers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.

Sukhwinder S et al. (2003) Mapping of a resistance gene effective against Karnal bunt pathogen of wheat Theoretical and Applied Genetics 106:287-292.

Paillard S et al. (2003) An integrative genetic linkage map of winter wheat (Triticum aestivum L.) Theoretical and Applied Genetics 107:1235-1242.

Roder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.

Roeder MS et al. (1995) Abundance, variability and chromosomal location of microsatellites in wheat. Molecular and General Genetics 246:327-333.

Data Source

Roeder, Marion S.

98.09.15

Remark

In Map Ta-Synthetic/Opata-SSR-7B, the interval most likely to contain locus is between Xfbb150 and Xbcd310

Associated with Karnal Bunt resistance QTL (R2 = 0.057, P = 0.00)

Possible Orthologs

Probe for Locus

Locus

[ Show all 6 ]

Reference

Roder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.

Roeder MS et al. (1995) Abundance, variability and chromosomal location of microsatellites in wheat. Molecular and General Genetics 246:327-333.

General Remarks

Insert contains repeat (GA)2GC(GA)33

PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.

Repeats type (GA)x2GC(GA)x33.

Product size 187 bp in Chinese Spring.

Type

PCR

SSR

PCR primers

5' GCACGTGAATGGATTGGAC 3'
5' TGACCCAATAGTGGTGGTCA 3'

Amplification Conditions

3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 60 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C

Polymorphism

WMS46

Source Species

Triticum aestivum

Source Germplasm

Chinese Spring

Data Source

Roeder, Marion S.	98.09.15
Roeder, Marion S.	94.10.17
Korzun, Victor N.	97.10


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