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GrainGenes Marker Report: Xgwm566-3B

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Locus
Xgwm566-3B
Type
Microsatellite
Chromosome
3B
Chromosome Arm
3BS
Map
Chinese_Spring_Deletion_SSR_3B-0.165
[ Show all 10 ]
[ Show Nearby Loci ]
QTL with Locus Marker
QFhs.crc-3B.2
Breakpoint Interval
C-3BS1-0.33
Map Data
Durum wheat, Svevo x Ciccio
[ Show all 11 ]
Probe
WMS566
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
ReferenceSomers DJ et al. (2003) Molecular mapping of novel genes controlling Fusarium head blight resistance and deoxynivalenol accumulation in spring wheat Genome 46:555-564.
ReferenceSalina E et al. (2000) Microsatellite mapping of the induced sphaerococcoid mutation genes in Triticum aestivum Theoretical and Applied Genetics 100:686-689.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source
Roeder, Marion S.98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-3B, the interval most likely to contain locus is between Xpsr903 and XATPase.2
Possible Orthologs
gwm566
[ Show all 6 ]



Probe for Locus
WMS566
Locus
Xgwm566-3B
[ Show all 8 ]
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (CA)21(GA)2(TA)8
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR
SSR
PCR primers
5' TCTGTCTACCCATGGGATTTG 3'
5' CTGGCTTCGAGGTAAGCAAC 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 60 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS566
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
Data Source
Roeder, Marion S.98.09.15

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