Query (optional)   in Class  

GrainGenes Marker Report: Xgwm635-7A

[ Printable Version ]  [ Submit comment/correction ]

Locus
Xgwm635-7A
Type
Microsatellite
Chromosome
7A
Chromosome Arm
7AS
Map
Chinese_Spring_Deletion_SSR_7A-0.74
[ Show all 8 ]
[ Show Nearby Loci ]
Breakpoint Interval
7AS5-0.59-0.89
Map Data
Durum wheat, Kofa x UC1113
[ Show all 8 ]
Species
Triticum aestivum
Probe
WMS635
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
ReferencePaillard S et al. (2003) An integrative genetic linkage map of winter wheat (Triticum aestivum L.) Theoretical and Applied Genetics 107:1235-1242.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source
Roeder, Marion S.98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-7A, the interval most likely to contain locus is distal to Xcdo545
Possible Orthologs
Xgwm635
[ Show all 13 ]



Probe for Locus
WMS635
Locus
Xgwm635b-7A
[ Show all 14 ]
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (CA)10(GA)14
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR
SSR
PCR primers
5' TTCCTCACTGTAAGGGCGTT 3'
5' CAGCCTTAGCCTTGGCG 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 60 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS635
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
Data Source
Roeder, Marion S.98.09.15