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GrainGenes Marker Report: Xgwm644-7B

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Locus
Xgwm644-7B
Type
Microsatellite
Chromosome
7B
Chromosome Arm
7BL
Map
Chinese_Spring_Deletion_SSR_7B0.165
[ Show all 7 ]
[ Show Nearby Loci ]
Breakpoint Interval
C-7BL2-0.33
Map Data
Wheat, 2006, purple grain
[ Show all 7 ]
Species
Triticum aestivum
Probe
WMS644
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
ReferencePaillard S et al. (2003) An integrative genetic linkage map of winter wheat (Triticum aestivum L.) Theoretical and Applied Genetics 107:1235-1242.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source
Roeder, Marion S.98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-7B, the interval most likely to contain locus is between Xcdo551 and Xbcd178
Possible Orthologs
gwm644
[ Show all 11 ]



Probe for Locus
WMS644
Locus
Xgwm644-6B
[ Show all 12 ]
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (GA)20
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR
SSR
PCR primers
5' GTGGGTCAAGGCCAAGG 3'
5' AGGAGTAGCGTGAGGGGC 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 60 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS644
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
Data Source
Roeder, Marion S.98.09.15

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