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GrainGenes Marker Report: gsh3 (Hordeum)

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Gene
gsh3 (Hordeum)
Full Name
Glossy sheath 3 (Eceriferum-a) - - ++
Synonym
Synonymcer-a (Hordeum)
Referencevon Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps : locus maps of complex genomes..
Gene Class
Eceriferum (glossy)
Locus
gsh3
His3A
URL
http://ace.untamo.net/cgi-bin/ace/tree/default?class=Gene&name=gsh3+(Hordeum)
Chromosome
7H
BGS Photo
BGS353a, Glossy sheath 3  [ BGS Database ]
BGS353c, Glossy sheath 3  [ BGS Database ]
BGS353d, Glossy sheath 3  [ BGS Database ]
Data Source
Franckowiak, Jerome D.96.10



Locus Associated with Gene
gsh3
Map
Hordeum-Genes2-7H48
[ Show Nearby Loci ]
Map Data
Barley genes 2
Associated Gene
gsh3 (Hordeum)
Gene Class
Eceriferum (glossy)
BGS Photo
BGS353a, Glossy sheath 3  [ BGS Database ]
BGS353c, Glossy sheath 3  [ BGS Database ]
BGS353d, Glossy sheath 3  [ BGS Database ]
Remark
BGN 26 description:
http://ace.untamo.net/cgi-bin/ace/tree/default?class=Gene&name=gsh3+(Hordeum)



Locus Associated with Gene
His3A
Type
Gene
RFLP
Synonym
Synonymgsh3 (Hordeum)
Chromosome
7H
Map
Barley-Consensus2-7H19.7
[ Show all 11 ]
[ Show Nearby Loci ]
Map Data
Barley consensus 2
[ Show all 13 ]
Probe
pc1-340
Associated Gene
gsh3 (Hordeum)
Gene Class
Eceriferum (glossy)
Reference
ReferenceRodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceKleinhofs A (2000) Coordinator's report: integrating molecular and morphological/physiological marker maps. [electronic resource] Barley Genetics Newsletter 32:152-159.
Remark
Number of populations contributing to the placement of His3A in the Barley, Consensus 2006 DArT maps = 1
The His3A RFLP/STS is a gene marker for the gsh3 (Hordeum) gene
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs
His3B
His3C
His3D



Locus
gsh3 (Hordeum)
Synonym
SynonymHis3A