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GrainGenes Marker Report: pcwx27

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Probe
pcwx27
Locus
Xpsr470(Wx)-4A
[ Show all 7 ]
Synonym
Other nameBGS16
KFP027
Wx
Reference
ReferenceRohde W et al. (1988) Structural analysis of the waxy locus from Hordeum vulgare. Nucleic Acids Research 16:7185-7186.
Remarks
starch syn, waxy
Type
cDNA
Linkage Group
Barley 1 (7H)
Source Gene Class
Starch synthase
Source Gene
wax (Hordeum)
Wx/wx (Hordeum)
Source Allele
Wax (Hordeum)
wax (Hordeum)
Source Species
Hordeum vulgare
Insert Size
2.397
2.4
Clone Vector
pUC
Excision Enzyme
EcoRI
Clone Location
Kleinhofs, Andris
Clone Authority
Rohde, W.
Data Source
Kleinhofs, Andris96.05.08
Info Source
Referencevon Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps: Locus Maps of Complex Genomes.


Locus for Probe
Glx
Type
RFLP
Chromosome
7H
Chromosome Arm
7HS
Map
Barley-Consensus-7H-54
[ Show all 6 ]
[ Show Nearby Loci ]
In QTL
QNb.StMo-7H
Map Data
Barley consensus
[ Show all 6 ]
Probe
pcwx27
Data Source
Blake, Tom05.04.19
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex


Locus for Probe
Glx(Wx)
Type
RFLP
Map
Barley-Consensus2-7H16.8
[ Show Nearby Loci ]
Map Data
Barley consensus 2
Probe
pcwx27


Locus for Probe
wx
Type
Gene
RFLP
Synonym
SynonymWx (Secale)
Chromosome
4R
7H
Chromosome Arm
4RL
7HS
Map
Barley-Consensus-7H-61.6
[ Show all 12 ]
[ Show Nearby Loci ]
Map Data
Barley consensus
[ Show all 12 ]
Probe
pcwx27
Wx
Associated Gene
wx
wx (Hordeum)
Wx (Secale)
Candidate Gene
Wx/wx (Hordeum)
Gene Class
Starch synthase
Waxy proteins
Reference
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Remark
Number of populations contributing to the placement of Wx in the Barley, Consensus 2006 DArT maps = 1


Locus for Probe
Xpsr470(Wx)
Type
RFLP
Chromosome
4A
Map
Wheat-Composite2004-4A113
[ Show Nearby Loci ]
Map Data
Wheat, Composite, 2004
Probe
pcwx27
Possible Orthologs
Xpsr470(Wx)-4A
[ Show all 7 ]
Locus for Probe
Xpsr470(Wx)-4A
Type
RFLP
Synonym
Other nameXWx-4A
ReferenceMcIntosh RA et al. (1995) Catalogue of gene symbols for wheat. Proceedings of the 8th International Wheat Genetics Symposium 1333-1500.
Previous nameXWx-4B
ReferenceChao S et al. (1989) RFLP-based genetic maps of wheat homoeologous group 7 chromosomes. Theoretical and Applied Genetics 78:495-504.
Chromosome
4A
Chromosome Arm
4AL
Species
Triticum aestivum
Probe
pcwx27
ReferenceRohde W et al. (1988) Structural analysis of the waxy locus from Hordeum vulgare. Nucleic Acids Research 16:7185-7186.
Reference
ReferenceChao S et al. (1989) RFLP-based genetic maps of wheat homoeologous group 7 chromosomes. Theoretical and Applied Genetics 78:495-504.
Remark
'Xpsr470(Wx)-4A' is a temporary designation.
Possible Orthologs
Xpsr470(Wx)
[ Show all 7 ]
Locus for Probe
Xpsr470(Wx)-7A
Type
RFLP
Synonym
Other nameXWx-7A
ReferenceChao S et al. (1989) RFLP-based genetic maps of wheat homoeologous group 7 chromosomes. Theoretical and Applied Genetics 78:495-504.
Chromosome
7A
Chromosome Arm
7AS
Species
Triticum aestivum
Probe
pcwx27
ReferenceRohde W et al. (1988) Structural analysis of the waxy locus from Hordeum vulgare. Nucleic Acids Research 16:7185-7186.
Reference
ReferenceChao S et al. (1989) RFLP-based genetic maps of wheat homoeologous group 7 chromosomes. Theoretical and Applied Genetics 78:495-504.
Remark
'Xpsr470(Wx)-7A' is a temporary designation.
Possible Orthologs
Xpsr470(Wx)
[ Show all 7 ]
Locus for Probe
Xpsr470(Wx)-7D
Type
RFLP
Synonym
Other nameXWx-7D
ReferenceChao S et al. (1989) RFLP-based genetic maps of wheat homoeologous group 7 chromosomes. Theoretical and Applied Genetics 78:495-504.
Chromosome
7D
Chromosome Arm
7DS
Species
Triticum aestivum
Probe
pcwx27
ReferenceRohde W et al. (1988) Structural analysis of the waxy locus from Hordeum vulgare. Nucleic Acids Research 16:7185-7186.
Reference
ReferenceChao S et al. (1989) RFLP-based genetic maps of wheat homoeologous group 7 chromosomes. Theoretical and Applied Genetics 78:495-504.
Remark
'Xpsr470(Wx)-7D' is a temporary designation.
Possible Orthologs
Xpsr470(Wx)
[ Show all 7 ]

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