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GrainGenes Marker Report: IWB5915

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Locus
IWB5915
Type
SNP
Synonym
Other nameBS00003879
BS00003879_51
ReferenceWang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796.
Chromosome Arm
5B
Map
Wheat, Yr genes and QTL 5B50.4
[ Show all 6 ]
[ Show Nearby Loci ]
Map Data
[ Hide all but 1 of 6 ]
Wheat, Yr genes and QTL
Wheat, Yr Update, 2021
Wheat_2014_90KSNP
Wheat_AB, Simeto x Molise Colli
Wheat_AB, Svevo x Zavitan
Wheat_AB_2015_Consensus
Species
Triticum aestivum
Probe
BS00003879_51
Reference
ReferenceWang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796.


Probe
BS00003879_51
Locus
IWB5915
BS00003879
BS00003879_51
Reference
ReferenceWang S et al. (2014) Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal 12:787-796.
ReferenceAllen AM et al. (2011) Transcipt-specific, single-nucleotide polymorphism discovery and linkage analysis in hexaploid bread wheat (Triticum aestivum L.) Plant Biotechnology Journal 9:1086-1099.
Type
SNP
KASP
PCR primers
FAM 5' CGGAGCGCCTCTCCGACATA 3'
Common 5' GACGCCGGTGCAAATATCGCGAT 3'
VIC 5' GGAGCGCCTCTCCGACATC 3'
Common 5' GACGCCGGTGCAAATATCGCGAT 3'
Specificity
FAM primer specific to A allele, and VIC primer specific to C allele.
Sequence
BS00003879_51


Locus for Probe
BS00003879
Type
SNP
Synonym
Other nameIWB5915
Map
Wheat, Avalon x Cadenza 5B197.3
Wheat_2017_LRC-5B27.2
[ Show Nearby Loci ]
In QTL
5B-AGBMNitr-ParW352-WATDE0047-RHHN12-BS00003879
5B-BMNUtE-ParW352-WATDE0047-RHHN12-BS00003879
5B-NHI-ParW468-WATDE0061-RHHN12-BS00003879
Map Data
Wheat, Avalon x Cadenza
Wheat_2017_LRC
Probe
BS00003879_51
Reference
ReferenceCheng S et al. (2024) Harnessing Landrace Diversity Empowers Wheat Breeding for Climate Resilience Nature.


Locus for Probe
BS00003879_51
Type
SNP
Map
Wheat-2018-NAM1-BxDharwarDry_5B71.9
[ Show all 23 ]
[ Show Nearby Loci ]
Map Data
[ Hide all but 1 of 23 ]
Wheat-2018-NAM1-Berkut-x-DharwarDry
Wheat-2018-NAM10-Berkut-x-PI9791
Wheat-2018-NAM11-Berkut-x-CItr4175
Wheat-2018-NAM12-Berkut-x-CItr11223
Wheat-2018-NAM13-Berkut-x-PI262611
Wheat-2018-NAM14-Berkut-x-PI70613
Wheat-2018-NAM15-Berkut-x-CItr7635
Wheat-2018-NAM16-Berkut-x-PI8813
Wheat-2018-NAM17-Berkut-x-PI82469
Wheat-2018-NAM18-Berkut-x-CItr15144
Wheat-2018-NAM19-Berkut-x-PI43355
Wheat-2018-NAM20-Berkut-x-PI94567
Wheat-2018-NAM23-Berkut-x-PI192001
Wheat-2018-NAM27-Berkut-x-PI192569
Wheat-2018-NAM28-Berkut-x-PI210945
Wheat-2018-NAM29-Berkut-x-PI220431
Wheat-2018-NAM3-Berkut-x-PI283147
Wheat-2018-NAM4-Berkut-x-PI366716
Wheat-2018-NAM5-Berkut-x-PI382150
Wheat-2018-NAM6-Berkut-x-PI470817
Wheat-2018-NAM7-Berkut-x-PI565213
Wheat-2018-NAM8-Berkut-x-PBW343
Wheat-2018-NAM9-Berkut-x-Vida
Species
Triticum aestivum
Probe
BS00003879_51

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