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GrainGenes Marker Report: WG380A

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Locus
WG380A
Type
RFLP
Synonym
SynonymWG380
Chromosome
7H
Map
Barley-Consensus2-7H126.1
[ Show all 18 ]
[ Show Nearby Loci ]
Map Data
[ Hide all but 1 of 20 ]
Barley consensus 2
Barley, Abiotic QTL Consensus
Barley, Agronomic QTL Consensus
Barley, BinMap 2005
Barley, Consensus 2005, SNP
Barley, Consensus 2006, DArT
Barley, Consensus 2006, Marcel
Barley, HxT
Barley, HxT basemap
Barley, Integrated, Marcel 2009
Barley, KxM
Barley, OWB
Barley, OWB, 2004
Barley, OWB, 2005
Barley, OWB, OPA2008
Barley, OWB, SNP
Barley, Steptoe x Morex, SNP
Barley, SxM
Barley, SxM, Feed QTLs
T.tauschii
Species
Hordeum vulgare
Probe
WG380
Reference
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Remark
Number of populations contributing to the placement of WG380A in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec
Possible Orthologs
[ Hide all but 1 of 9 ]
WG380
WG380a-7H
WG380B
WG380c
Xcnl.WG380A
Xcnl.WG380B
Xwg380
Xwg380-7A
Xwg380-7B



Probe for Locus
WG380
Locus
WG380A
[ Show all 11 ]
Type
Genomic
Polymorphism
WG380 XbaI
WG380 EcoRI
WG380 EcoRV
WG380 HindIII
Linkage Group
[b 1H, 1LH]
Insert Enzyme
PstI
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
Insert Size
1.6
Clone Vector
pGem-4
Excision Enzyme
PstI
Clone Location
GrainGenes Probe Repository
Sorrells, Mark E.
Image
WG380 SO autoradiogram
Data Source
ATMI92.09
Gill, Bikram S.92.09