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GrainGenes Marker Report: cdo1385f

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Locus
cdo1385f
Type
RFLP
Map
Oat-2004-OT328xDumont_10
Oat-2004-TxM_33
Oat-KxO/2003-4_1212.4
[ Show Nearby Loci ]
Map Data
Oat, KxO, 2003
Oat-2004-OT328xDumont
Oat-2004-TxM
Probe
CDO1385
Homology
AF216313_1e-value: 8e-04(AF216313) cytochrome P450 [Helianthus annuus]
Remark
Marker placement value = 2.47 cM on map Oat-KxO/2003-4_12
Marker is not a framework marker on map Oat-KxO/2003-4_12
Possible Orthologs
cdo1385a
[ Show all 17 ]



Probe for Locus
CDO1385
Locus
[ Hide all but 1 of 18 ]
Xcdo1385A
Xcdo1385B
Xcdo1385C
Xcdo1385D
cdo1385a
cdo1385b
cdo1385c
cdo1385d
cdo1385e
cdo1385f
CDO1385A
CDO1385B
CDO1385C
CDO1385D
CDO1385F
Xcdo1385H
Xcdo1385F
CDO1385E
Reference
ReferenceWight CP et al. (2004) Discovery, localization, and sequence characterization of molecular markers for the crown rust resistance genes Pc38, Pc39, and Pc48 in cultivated oat (Avena sativa L.) Molecular Breeding 14:349-361.
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
BE439299
CDO1385_WHE05F02.s1
CN180770
Polymorphism
CDO1385 DraI
Source Species
Avena sativa
Source Germplasm
Brooks CIav9260
Source Tissue
etiolated leaf
PCR size
1.4
Clone Vector
pBluSK
Excision Enzyme
EcoRI
XhoI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 60 sec, 50 C 40 sec, 72 C 60 sec, 34 times; 94 C for 60 sec, 50 C 40 sec, 72 C 10 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
CDO1385 KO autoradiogram
Data Source
Sorrells, Mark E.96.07