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GrainGenes Marker Report: Ba2

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Locus
Ba2
Type
Trait
Chromosome
4A
Chromosome Arm
4AL
Map
Wheat-Composite2004-4A34
[ Show Nearby Loci ]
Species
Triticum aestivum
Probe
CDO1387
Associated Gene
Ba2 (Triticum)
Gene Class
Blue aleurone
Reference
ReferenceDubcovsky J et al. (1996) Genetic map of diploid wheat, Triticum monococcum L., and its comparison with maps of Hordeum vulgare L. Genetics 143:983-999.
Data Source
Wheat Gene Catalogue
Remark
Trait marker Xcdo1387-4A
Nearby marker on Composite map: Xcdo1387
Position on Composite map estimated by GrainGenes.



Probe for Locus
CDO1387
Locus
cdo1387
[ Show all 8 ]
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
OatUni-ZAPXR [c]
Type
cDNA
Sequence
AA231831
AA231881
Polymorphism
CDO1387 EcoRI
CDO1387 XbaI
Linkage Group
4L
Insert Enzyme
EcoRI
XhoI
Source Species
Avena sativa
Source Germplasm
Brooks CIav9260
Source Tissue
etiolated leaf
Insert Size
0.8
PCR size
0.8
Clone Vector
pBluSK
Excision Enzyme
EcoRI
XhoI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 60 sec, 50 C 40 sec, 72 C 60 sec, 34 times; 94 C for 60 sec, 50 C 40 sec, 72 C 10 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
CDO1387 BROWSSM autoradiogram
CDO1387 SO autoradiogram
Data Source
Sorrells, Mark E.96.07
ATMI92.09



Gene Associated with Locus
Ba2 (Triticum)
Gene Class
Blue aleurone
Locus
Ba2
Ba2-4A
Reference
ReferenceDubcovsky J et al. (1996) Genetic map of diploid wheat, Triticum monococcum L., and its comparison with maps of Hordeum vulgare L. Genetics 143:983-999.
Chromosome
4A^m^
Chromosome Arm
4A^m^L
Germplasm
Diploid stockT. monococcum ssp. aegilopoides G3116
Wheat Gene Catalog Reference
282
ReferenceDubcovsky J et al. (1996) Genetic map of diploid wheat, Triticum monococcum L., and its comparison with maps of Hordeum vulgare L. Genetics 143:983-999.
Data Curator
Matthews, David E.2007.04



Probe
BA2
Locus
Xba2.3
Xba2.2
Xba2.1



Locus for Probe
Xba2.1
Map
Ta-NxW-3B115.7
[ Show Nearby Loci ]
Map Data
Wheat, Nanda2419 x Wangshuibai
Probe
BA2



Locus for Probe
Xba2.2
Map
Ta-NxW-2D179.3
[ Show Nearby Loci ]
Map Data
Wheat, Nanda2419 x Wangshuibai
Probe
BA2



Locus for Probe
Xba2.3
Map
Ta-NxW-2B170.6
[ Show Nearby Loci ]
Map Data
Wheat, Nanda2419 x Wangshuibai
Probe
BA2