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GrainGenes Marker Report: D1.1_ctg1046

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Locus
D1.1_ctg1046
Type
BAC_contig
Map
Chinese_Spring_Deletion_3D-0.395
Chinese_Spring_Deletion_6D0.9
Chinese_Spring_Deletion_7D0.715
Ta-Physical-Gill-4D3.06
[ Show Nearby Loci ]
Probe
BCD110
BE489323
Homology
AAF51757.1e-value: 0.50(AE003595) CG7162 gene product [Drosophila melanogaster]
AC007797_9e-value: 2e-09(AC007797) Unknown Protein [Arabidopsis thaliana]
AC007797_9e-value: 7e-09(AC007797) Unknown Protein [Arabidopsis thaliana]
AC007797_9e-value: 0.22(AC007797) Unknown Protein [Arabidopsis thaliana]
AC007797_9e-value: 0.20(AC007797) Unknown Protein [Arabidopsis thaliana]



Probe for Locus
BCD110
Locus
Xbcd110
[ Show all 12 ]
Synonym
SynonymHAR35_17521
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Lambda ZAP II library
Bar.LambZAPII [c]
Bar.LambZAPII
Type
cDNA
Sequence
BE438612
[ Show all 14 ]
Polymorphism
BCD110 EcoRI
BCD110 EcoRV
BCD110 DraI
Linkage Group
4L
Insert Enzyme
EcoRI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
Insert Size
1.1
PCR size
1.1
Clone Vector
pBluSK
pBluSK-
BS-SK-
Excision Enzyme
EcoRI
Vector PCR primers
M13forward
M13reverse
Vector Amplification
94 C for 78 sec, 50 C 78 sec, 72 C 120 sec, 25 times; 94 C for 78 sec, 50 C 78 sec, 72 C 5 min, 1 time
Antibiotic
Ampicillin
Clone Location
Sorrells, Mark E.
GrainGenes Probe Repository
Clone Authority
Sorrells, Mark E.
Image
BCD110 BROWS autoradiogram
BCD110 KO autoradiogram
Data Source
Sorrells, Mark E.96.07
ATMI92.09



Probe for Locus
BE489323
Locus
HD014E12
RI026L01
D1.1_ctg1046
BE489323-1A
Sequence
BE489323
Source Species
Triticum aestivum