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GrainGenes Marker Report: Fr-A2 (Triticum)

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Gene
Fr-A2 (Triticum)
Gene Class
Frost resistance
Locus
Fr-A2
S2269949
Reference
ReferenceSieber AN et al. (2016) Copy number variation of CBF-A14 at the Fr-A2 locus determines frost tolerance in winter durum wheat Theoretical and Applied Genetics 129:1087-1097.
ReferenceZhu J et al. (2014) Copy number and haplotype variation at the VRN-A1 and central FR-A2 loci are associated with frost tolerance in hexaploid wheat Theoretical and Applied Genetics 127:1183-1197.
ReferenceVagujfalvi A et al. (2003) The cold-regulated transcriptional activator Cbf3 is linked to the frost-tolerance locus Fr-A2 on wheat chromosome 5A Molecular Genetics and Genomics 269:60-67.
QTL Associated with Gene
QFSelt.wpg-5A.1



Locus Associated with Gene
Fr-A2
Type
Trait
Chromosome
5A
Chromosome Arm
5A
Map
Wheat-Composite2004-5A36
[ Show Nearby Loci ]
Species
Triticum aestivum
Probe
BCD508
S2269949
Associated Gene
Fr-A2 (Triticum)
Homology
T22388e-value: 4.6hypothetical protein F48F7.4 - Caenorhabditis elegans this gene~cDNA EST yk50c1.3 comes from this gene~cDNA EST yk50c1.5 comes from this gene~cDNA EST yk167b2.3 comes from this gene~cDNA EST yk167b2.5 comes from this gene~cDNA EST yk145e8.3>
Gene Class
Frost resistance
Reference
ReferenceVagujfalvi A et al. (2003) The cold-regulated transcriptional activator Cbf3 is linked to the frost-tolerance locus Fr-A2 on wheat chromosome 5A Molecular Genetics and Genomics 269:60-67.
Data Source
Wheat Gene Catalogue
Remark
Trait marker Xbcd508-5A
Nearby marker on Composite map: Xbcd508
Position on Composite map estimated by GrainGenes.



Locus Associated with Gene
S2269949
Chromosome
5A
Map
Wheat, Finch x Eltan 5A116.8
[ Show Nearby Loci ]
In QTL
QFSelt.wpg-5A.1
Map Data
Wheat, Finch x Eltan
Probe
S2269949
Associated Gene
Fr-A2 (Triticum)
Gene Class
Frost resistance