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GrainGenes Marker Report: k00070

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Locus
k00070
Type
CAPS
Chromosome
1H
Map
Hv-HNxH602-1H113.1
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare
Hordeum vulgare subsp. spontaneum
Probe
baak13n06
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
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Restriction enzyme used for CAPS analysis = HapII
SNP = T/C
SNP structure (UNICODE) = ACCATGTCGCYGGGAAGAGCC
Parent 1 SNP sequence = ACCATGTCGCTGGGAAGAGCC
Parent 2 SNP sequence = ACCATGTCGCCGGGAAGAGCC
Recognized sequence for CAPs locus = CCGG



Probe for Locus
baak13n06
Locus
k00070
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type
PCR
PCR primers
Left 5' - TCCTTCAGAGGCGAACCTAA
Right 5' - GACCAAGATAAGCGCGAAAG
Sequence
AV911643
PCR size
414

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