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GrainGenes Marker Report: k00072

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Locus
k00072
Type
SNP
Chromosome
1H
Map
Hv-HNxH602-1H122.7
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare
Hordeum vulgare subsp. spontaneum
Probe
baak14c12
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
SNP = G/A
SNP structure (UNICODE) = TCAAGTTCTCRGTGTCGTAGA
Parent 1 SNP sequence = TCAAGTTCTCGGTGTCGTAGA
Parent 2 SNP sequence = TCAAGTTCTCAGTGTCGTAGA



Probe for Locus
baak14c12
Locus
k00072
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = expressed protein [Arabidopsis thaliana] gb AAK91458.1 AT4g15470/dl3775w [Arabidopsis thaliana]
Type
PCR
PCR primers
Left 5' - TGGGCTCATAGCAAAGAGGT
Right 5' - AGCAGAAGTCTCAAGCTGCC
Sequence
BJ454627
PCR size
491