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GrainGenes Marker Report: k00083

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Locus
k00083
Type
SNP
Chromosome
2H
Map
Hv-HNxH602-2H83.7
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare
Hordeum vulgare subsp. spontaneum
Probe
baak14a24
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
SNP = G/A
SNP structure (UNICODE) = CGTGGTACTTRTCGCCGTTGA
Parent 1 SNP sequence = CGTGGTACTTGTCGCCGTTGA
Parent 2 SNP sequence = CGTGGTACTTATCGCCGTTGA



Probe for Locus
baak14a24
Locus
k00083
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = r40g3 protein - rice emb CAA70175.1 osr40g3 [Oryza sativa (indica cultivar-group)]
Type
PCR
PCR primers
Left 5' - GCCCAGGCAACATAAAGTGT
Right 5' - TGACGTGGAGCTCAAAAGTG
Sequence
BJ543859
PCR size
470