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GrainGenes Marker Report: Nar7 (Hordeum)

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Gene
Nar7 (Hordeum)
Gene Class
NAD(P)H bispecific nitrate reductase
Locus
Nar7
X60173
Candidate Locus
Nar7
Reference
ReferenceKleinhofs A and Kilian A (1994) DNA based markers in plants. 1.
Chromosome
6H
Clone
pMJ4.1
Info Source
Referencevon Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps : locus maps of complex genomes..



Locus Associated with Gene
Nar7
Type
Gene
RFLP
Synonym
SynonymNar7 (Hordeum)
Chromosome
6H
Chromosome Arm
6HL
Map
Barley-Consensus-6H18.1
[ Show all 18 ]
[ Show Nearby Loci ]
In QTL
QHt.StMo-6H
Map Data
Barley consensus
[ Show all 18 ]
Species
Hordeum vulgare
Probe
NAR7
pMJ4.1
Associated Gene
Nar7 (Hordeum)
Candidate Gene
Nar7 (Hordeum)
Gene Class
NAD(P)H bispecific nitrate reductase
Reference
[ Hide all but 1 of 6 ]
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceLi JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027.
Data Source
Blake, Tom05.04.19
Close, Timothy J.
Remark
Number of populations contributing to the placement of Nar7 in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'



Locus Associated with Gene
X60173
Map
Hordeum-Bins-6H93.7
[ Show Nearby Loci ]
Map Data
Barley, BinMap 2005
Associated Gene
Nar7 (Hordeum)
Gene Class
NAD(P)H bispecific nitrate reductase
Reference
ReferenceWarner R et al. (1995) Association of the NAD(P)H-bispecific nitrate reductase structural gene with the Nar7 locus in barley Genome 38:743-746.
Remark
The X60173 RFLP/STS is a gene marker for the Nar7 (Hordeum) gene



Locus Candidate for Gene
Nar7
Type
Gene
RFLP
Synonym
SynonymNar7 (Hordeum)
Chromosome
6H
Chromosome Arm
6HL
Map
Barley-Consensus-6H18.1
[ Show all 18 ]
[ Show Nearby Loci ]
In QTL
QHt.StMo-6H
Map Data
Barley consensus
[ Show all 18 ]
Species
Hordeum vulgare
Probe
NAR7
pMJ4.1
Associated Gene
Nar7 (Hordeum)
Candidate Gene
Nar7 (Hordeum)
Gene Class
NAD(P)H bispecific nitrate reductase
Reference
[ Hide all but 1 of 6 ]
ReferenceClose TJ et al. (2009) Development and implementation of high-throughput SNP genotyping in barley. BMC Genomics 10:582.
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceLi JZ et al. (2003) Development and genetic mapping of 127 new microsatellite markers in barley Theoretical and Applied Genetics 107:1021-1027.
Data Source
Blake, Tom05.04.19
Close, Timothy J.
Remark
Number of populations contributing to the placement of Nar7 in the Barley, Consensus 2006 DArT maps = 1
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'



Locus
Nar7 (Hordeum)
Synonym
SynonymNar7