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GrainGenes Marker Report: vrs1 (Hordeum)

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Gene
vrs1 (Hordeum)
Full Name
Six-rowed spike 1; Six-rowed spike 1 (Intermedium spike-d); Six-rowed spike 1 (Reduced lateral spikelet appendage)
Synonym
SynonymInt-d (Hordeum)
Referencevon Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps : locus maps of complex genomes..
lr (Hordeum)
Referencevon Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps : locus maps of complex genomes..
v (Hordeum)
Referencevon Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps : locus maps of complex genomes..
Gene Class
Awnless lateral floret
Intermedium spike
Six-rowed spike
Allele
Vrs1 (Hordeum)
vrs1 (Hordeum)
Locus
mVrs1
vrs1
vrs1(Int-d)
vrs1(lr)
vrs1(v)
Reference
ReferenceBoyd C et al. (2008) Avrs1mutant in CIho 4196 to facilitate breeding of 6-rowed cultivars with Fusarium Head Blight resistance Barley Genetics Newsletter 38:7-9.
URL
http://ace.untamo.net/cgi-bin/ace/tree/default?class=Gene&name=vrs1+(Hordeum)
Chromosome
2H
Image
Barley, vrs1 (six-row spike) phenotype
Barley, Vrs1 (two-row spike) phenotype
BGS Photo
BGS6a, Six-rowed spike 1  [ BGS Database ]
[ Show all 7 ]
Data Source
Franckowiak, Jerome D.96.10



Locus Associated with Gene
mVrs1
Type
Gene
Chromosome
2H
Map
Hordeum-Bins-2H92
Hv-Consensus2006-Marcel-2H88.55
Hv-Integrated2009-2H86.5
Hv-Vada/SusPtrit-2H65.18
[ Show Nearby Loci ]
Map Data
Barley, BinMap 2005
Barley, Consensus 2006, Marcel
Barley, Integrated, Marcel 2009
Barley, Vada x SusPtrit  Mapped_by_function  vrs1 (Hordeum)
Probe
Mapped_by_function
Associated Gene
vrs1 (Hordeum)
Gene Class
Awnless lateral floret
Intermedium spike
Six-rowed spike
Data Source
Kleinhofs, Andris
Remark
This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Vada x SusPtrit,Oregon Wolfe Barleys
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Vada x SusPtrit; Oregon Wolfe Dom x Rec



Locus Associated with Gene
vrs1
Type
Gene
Synonym
Synonymvrs1 (Hordeum)
Chromosome
2H
Map
Hordeum-AxK-2H82.4
[ Show all 15 ]
[ Show Nearby Loci ]
In QTL
QDon.dah-2H.2
[ Show all 16 ]
Map Data
Barley, Abiotic QTL Consensus
[ Show all 15 ]
Species
Hordeum vulgare
Associated Gene
vrs1 (Hordeum)
Gene Class
Awnless lateral floret
Intermedium spike
Six-rowed spike
BGS Photo
BGS6a, Six-rowed spike 1  [ BGS Database ]
[ Show all 7 ]
Reference
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
ReferenceWenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceMesfin A et al. (2003) Quantitative trait loci for fusarium head blight resistance in barley detected in a two-rowed by six-rowed population Crop Science 43:307-318.
Remark
BGN 26 description:
http://ace.untamo.net/cgi-bin/ace/tree/default?class=Gene&name=vrs1+(Hordeum)
Number of populations contributing to the placement of Vrs1 in the Barley, Consensus 2006 DArT maps = 1



Locus Associated with Gene
vrs1(Int-d)
Map
Hordeum-Genes2-2H-30
[ Show Nearby Loci ]
Map Data
Barley genes 2
Associated Gene
vrs1 (Hordeum)
Gene Class
Awnless lateral floret
Intermedium spike
Six-rowed spike



Locus Associated with Gene
vrs1(lr)
Map
Hordeum-Genes2-2H-30
[ Show Nearby Loci ]
Map Data
Barley genes 2
Associated Gene
vrs1 (Hordeum)
Gene Class
Awnless lateral floret
Intermedium spike
Six-rowed spike



Locus Associated with Gene
vrs1(v)
Type
Gene
Synonym
Other namev
Chromosome
2H
Chromosome Arm
2HL
Map
Hordeum-Genes2-2H-30
Hordeum-HxM-base-2H89.4
[ Show Nearby Loci ]
In QTL
QDp.nab-2H
[ Show all 6 ]
Map Data
Barley genes 2
Barley, HxM/QTL
Associated Gene
vrs1 (Hordeum)
Gene Class
Awnless lateral floret
Intermedium spike
Six-rowed spike



Locus
vrs1 (Hordeum)
Synonym
Synonymvrs1