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GrainGenes Marker Report: yst4 (Hordeum)

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Gene
yst4 (Hordeum)
Full Name
Yellow streak 4
Gene Class
Yellow striped leaf
Locus
CDO537
yst4
URL
http://ace.untamo.net/cgi-bin/ace/tree/default?class=Gene&name=yst4+(Hordeum)
Chromosome
2H
Chromosome Arm
2HL
BGS Photo
BGS85a, Yellow streak 4  [ BGS Database ]
BGS85b, Yellow streak 4  [ BGS Database ]
BGS85d, Yellow streak 4  [ BGS Database ]
Data Source
Franckowiak, Jerome D.96.10



Locus Associated with Gene
CDO537
Type
RFLP
Synonym
SynonymAz94 (Hordeum)
POPA3_0251
Chromosome
2H
Chromosome Arm
2HS
Map
Barley-Consensus-2H-3.5
[ Show all 13 ]
[ Show Nearby Loci ]
Map Data
Barley consensus
[ Show all 13 ]
Probe
CDO537
Associated Gene
Az94 (Hordeum)
yst4 (Hordeum)
Homology
T51536e-value: 7e-08hypothetical protein T20K14_190 - Arabidopsis thaliana
Gene Class
Yellow striped leaf
Reference
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceKleinhofs A (2000) Coordinator's report: integrating molecular and morphological/physiological marker maps. [electronic resource] Barley Genetics Newsletter 32:152-159.
Data Source
Blake, Tom05.04.19
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex
Possible Orthologs
Xcdo537-2
Xcnl.CDO537



Locus Associated with Gene
yst4
Type
Gene
Map
Hordeum-Bins-2H64
[ Show Nearby Loci ]
Map Data
Barley, BinMap 2005
Associated Gene
yst4 (Hordeum)
Gene Class
Yellow striped leaf
BGS Photo
BGS85a, Yellow streak 4  [ BGS Database ]
BGS85b, Yellow streak 4  [ BGS Database ]
BGS85d, Yellow streak 4  [ BGS Database ]
Data Source
Kleinhofs, Andris
Remark
BGN 26 description:
http://ace.untamo.net/cgi-bin/ace/tree/default?class=Gene&name=yst4+(Hordeum)
This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin