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GrainGenes Probe Report: AM41

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
AM41  [ Marker Report ]
Locus
am41
AM41
Reference
ReferenceLi CD et al. (2000) The development of oat microsatellite markers and their use in identifying relationships among Avena species and oat cultivars Theoretical and Applied Genetics 101:1259-1268.
General Remarks
Insert contains repeat (GAA)10
Among 20 oat cultivars, 2 alleles were found, polymorphic information content (PIC) = 0.1.
Type
PCR
SSR
PCR primers
5'CCA AAG GAA ACA AGT CAA TAG
5'TTC CCG CAA AGT CAT CAT
SSR size
205
Amplification Conditions
Average melting temperature (degrees C) = 42
Source Species
Avena sativa
Source Germplasm
Ogle (oat)
Data Source
Scoles, Graham J.

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