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GrainGenes Probe Report: BE405585-4A

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE405585-4A
Data at Wheat_SNP
BE405585-4A
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP G>C;C>T at 52;339
SNP INS at 8, 3
Reference sequence CCACCTGTTCCACCACAAGAAGGAGGGCGAGGACTTCCAGCCCGCCGCTGAGGGCGGCGTCGACACGTACGGGTACTCGACCGAGACGGTGGTGACCGCCACCGGCAACGACGGCGAGTACGAGCGGATCACCAAGGAGGAGAAGCACCACAAGCACAAGGAGCACCTCGGCGAGATGGGCGCAGCCGCGGCCGGAGCCTTCGCCCTCGTACGCCCTCTCTCATCGTAACTAGGAGTAGTAATTACCATACGAATATATAGCTCTTGTCGGGCTTGGCTAATGGATTGCGTGTCTACGTGCAGTACGAGAAGCACGAGGCGAAGAAGGACCCGGAGCACGCGCACAAGCACAAGATCGAGGAGGAGGTGGCTGCCGCCGCAGCCGTCGGCGCCGGCGGCTTCGTCTTCCACGAGCACCACGAGAAGAAGCAGGACCACAAGG
Reference sequence TCCACCACAAGGAGGGCGAGGACTTCCAGCCCGCCGCTGACGGCGGCGTCGACACGTACGGGTACTCGACCGAGACGGTGGTGACCGCCACCGGCAACGACGGCGAGTACGAGCGGATCACCAAGGAGGAGAAGCACCACAAGCACAAGGAGCACCTCGGCGAGATGGGCGCAGCCGCGGCCGGAGCCTTCGCCCTCGTACGCCCTCTCTCATCGTAACTAGGAGTAGTAATTACCATACGAATATATAGCTCTTGTCGGGCTTGGCCTAATGGATTGCGTGTCT
Type
EST
SNP
PCR primers
BE405585A_R1 GTACTGCACGTAGACACGCAA
BE405585_cpF1 ACCACCTGTTCCACCACAAG
Sequence
NSFT03P2_Contig17732
Linkage Group
4A
Source Species
Triticum aestivum
Data Source
You, Frank Mingan2010.01

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