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GrainGenes Probe Report: BE423792-2B

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE423792-2B
Data at Wheat_SNP
BE423792-2B
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP G>A;G>A;T>A;A>T;A>C;T>C;A>G;DEL;C>T;C>A at 95;98;111;112;151;157;197;207;213;299
SNP G>T at 69
Reference sequence GGGCTACATCAAGTTCCTGCACCAGCAGCTCGAGGTTCTTAGCTCCCCGTACATGCGCCCTCCTCCGGCGCCCGGCGCCGAGCCTGAGGTGAGAGAGGGCTCACGCTGTTTATTTAGCCGATCGTCGCACACTATTCTGAAATCCCCTGAACATTCTGAACATGATAAACTCTGACAGAAGTATAAACCGCGGTGTATGCTTTTTTTATTTGCACTATACTGAAGAAATGCATCTTATAATGGTCGATGCAGGATCCGGACCACTACAGCCTGCGGAACCGCGGCCTGTGCCTGGTGCCGGTGGAGCAGACGCTGCAGCTG
Reference sequence CGGGCTACATCAAGTTCCTGCACCAGCAGCTCGAGGTTCTTAGCTCCCCGTACATGCGCCCTCCTCCGGCGCCCGGCGCCGAGCCTGAGGTGAGAAAGAGCTCACGCTGTTATTTTAGCCGATCCTCGCACACTATTCTGAAATTCCCTGAACATTCTGAACATGATAAACTCTGACAGAAGTATAAACCGCAGTGTATGCTTTTTTATTTGTACTGAAGAAATGCATCTTATACTGGTCGATGCAGGATCC
Type
EST
SNP
PCR primers
BE423792B_R2 GGATCCTGCATCGACCAGTAT
BE423792_cpF1 TCGGGCTACATCAAGTTCCT
Sequence
NSFT03P2_Contig13448
Linkage Group
2B
Source Species
Triticum aestivum
Data Source
You, Frank Mingan2010.01

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