Query (optional)   in Class  

GrainGenes Probe Report: BE425146-4A

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE425146-4A
Data at Wheat_SNP
BE425146-4A
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP A>G at 349
SNP C>T at 375
SNP T>C;G>A;A>G at 73;172;462
Reference sequence GTTCCGTAAAAAATGGGGATACGAGATGCCTGTGGATGTATTAGCAAAATGGTATCACACCTTATCCTTATCTGAGTTCCTTTTTGAGTTACCGAAGTGGCAGCTATAACACTGCATGTTTGATTAATATTTCAGGATAGCAGACAAAGCACAAATATACACGCAGCATGCGTACATGAGACCCCTTGGTGTAGGTTAGTACTATCACATTTACATCTGTTAGTACTATGATGTTGTAGTGTTAGACCAATTAGCTTAATGCCTATTGCCCACCATAATCATTTTCTTTGGTATGTTCTTCAGTTGCCATGGTCTTGGGTTATGATGAAGAGAAAAATGCTCAGCTCTTCAAGTGTGACCCCGCAGGTCACTTCTTTGGACACAAGGTATACAGTAATTTTCTGCACTGCACTATATTATTCCTCAATTCTATACCCAGCCAAATGCTTAATCTTTGTCTTATGTGTAGCAAACCACTAACAAGTTCTTGTTTTTCAGGCAACTAGTGCCGGACTGAAG
Reference sequence TATCCTTATCCGAGTTCCTTTTTGAGTTACCGAAGTGGCAGCTATAACACTGCATGTTTGATTAATATTTCAGGATAGCAGACAAAGCACAAATATACACGCAGCATGCGTACATGAGACCCCTTGGTGTAGGTTAGTACTATCACATTTACATCTGTTAGTACTATGATGTTGTAGTGTTAGACCAATTAGCTTAATGCCTATTGCCCACCATAATCGTTTTCTTTGGTATGTTCTTCAGTTGCCATGGTCTTGGGTTATGATGAAGAGAAAAATGCTCAGCTCTTCAAGTGTGACCCCGCAGGTCACTTCTTTGGACACAAGGTATACAGTAATTTTTTGCACTGCACTATATTATTCCTCAATTCTATACCCAGCCAAATGCTTAATCTTTGTCTTATGTGTAGCAAACCACTAACAAGTTCTTGTTTTTCAGGCAACTAGTGCCGGACTGAAG
Type
EST
SNP
PCR primers
BE425146A_F1 TATCACACCTTATCCTTATCCG
BE425146_cpR1 TTGCTTCCTGCTCCTTCAGT
Sequence
NSFT03P2_Contig18561
Linkage Group
4A
Source Species
Triticum aestivum
Data Source
You, Frank Mingan2010.01

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.