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GrainGenes Probe Report: BE425978-1D

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE425978-1D
Data at Wheat_SNP
BE425978-1D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP G>A;C>T at 53;128
SNP G>C;G>A;INS;C>T;G>A at 106;128;146, 1;202;329
Reference sequence TAAGTCGAGGATCTTAACTCGTTGTTCTGTCTTGTTCATGCATTTTCCATCTGTACTAAAAAAACATTTTTTAATATATTTTCTTTAAAACTAATTTAATGCATTCTGTTACTGCACTTGATATGTACCATATCTCGAAAAGAGAAAAACACTTGACTGGGTGTGTTGAATATGTTGCAGCCGCAAGCCAGAGAAAAGGCTGATAACGAAGGATTTGAGGTCAGTGTTGTTAAGACCAGCTTTAAGGCCACCACGAAAGCTTTGGCAGAAAATGAAGGGNATGGAATTG
Reference sequence ACATTCTAAACCATTTAAGCATCCCAGCCGCTTGTTTCACTCATCCAGAAATCAGTATGGTTGGGCTGACAGAGGTAAGTCGAGGATCTTAACTCCTTGTTCTGTGTTGTTCATGCATTTTCCATCTGTACTAAAAAAACATTTTTAATATATTTTCTTTAAAACTAATTTAATGCATTCTGTTACTGCACTTGATATGTACCATATCTCGAAAAGAGAAAAACACTTGACTGGGTGTGTTGAATATGTTGCAGCCGCAAGCCAGAGAAAAGGCTGATAACGAAGGATTTGAGGTCAGTGTTGTTAAGACCAGCTTTAAGGCCAACACGAAAGCTTTGGCAGAAAATGAA
Type
EST
SNP
PCR primers
BE425978_cpF1 CTGGGAGGGACCACATTCTA
BE425978D_F2 AAGTCGAGGATCTTAACTCGTT
Sequence
NSFT03P2_Contig12017
Linkage Group
1D
Source Species
Triticum aestivum
Data Source
You, Frank Mingan2010.01

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