Query (optional)   in Class  

GrainGenes Probe Report: BE444599-2B

[ Printable Version ]  [ Submit comment/correction ]

Probe
BE444599-2B
Data at Wheat_SNP
BE444599-2B
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP C>T;DEL at 13;49
SNP C>T at 516
Reference sequence CAGATAGGCCTGCACACATGGAACAACTCTGGATTAACACTTTTTTTTTCAAAATCGTGGTACCTCTTAACTGAACAAAACAGAATGAATATAGTTTCATTTTGCACATCAATGTTTTATAAGGGATAAACTTCCAAGACCAGCTAGCATGCCATTATCTGTTAAGAAACTTTTCAGTTTTCACCACATAATCTTTCTCGCTGCAAGAATTATCTTGCCGAAAGAAGGAAAAAAACAAAGTTTCAGAATGTACACTCTATTCAGCGAACACATTTTGGTGAATACCAAGGTTTCCCTAAGAAACCTTGGAAAGTACAAATTTCTGAATAGCTAAGCACATTTTGGTGTAAATATTACCTTGCATTGGCTGTTGACGGCATTGCACTTATCAGCAGCTGAACCAAGTCTTAAATGGAATGCAGCGGCATCCGAGTACCTGTCAGAGATGGCCAAATATGAAATGACACATAAATCAGTACATAAACACGATTGCTAAAAATGC
Reference sequence AACGCAAATTCTGAAACTTTGTTTTTTCCCCCCTTTCGGGCAAGATAATTCTCACAGCGAGAAAGATTATGCGGTGAAAACCGAGAAGTTTCTTAACAGATAATAGCATGCTAGCTGGCCTTGGAAGTTTACCCCTTATTAAACATTCATATGCAAAATGAAACTATATTCATTCTTGCTTGTTCAGTTAAGACTTAAGAGGTATCACAATTTTGAAAAATAAGTGTTAATCCGGAGTTGTTCCATGTGTGCAGGCCTATCTGAGTGCAATCATTATCTACCTTTATGCACATGATTTTCAACAAGCTCAGAAATGCTACAATGATTGCTCAGAGTAAGTAATGTGTTGGTGATAGACTGGTATTGCATTGGCATGTAACATATTTTGTGTTATGTTGGTTGTATTAAATCACTTTTCTTTCCTCTTTTTCTGTGTTGCAGGGTTCAAGGCTTCTTGAATAGTGACCCACCATAAGAGGTGCAATGAAACTGTTGTCTGCTTATGAGGAAGGCGACGCGAAGAAATC
Type
EST
SNP
PCR primers
BE444599B_F1 TGTGTTCACTGAATAGAACGCAA
BE444599_cpR1 TTACCACATGGTCGAGGTGA
Sequence
NSFT03P2_Contig17602
Linkage Group
2B
Source Species
Triticum aestivum
Data Source
You, Frank Mingan2010.01