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GrainGenes Probe Report: BE518440-2D

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE518440-2D
Data at Wheat_SNP
BE518440-2D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
[ Hide all but 1 of 8 ]
SNP T>C at 218
SNP INS at 396, 2
SNP T>C;T>C;T>C at 30;218;386
SNP T>C;T>C at 218;386
SNP T>C;T>C;C>G;G>T;G>T;INS;C>T at 32;388;422;433;461;461, 1;489
SNP T>C;C>T;T>A at 218;317;360
Reference sequence CTTTTTCTTTGGGTCAGTTACTTTCGCTTTCTTCATGTCAATTTCCTCTATGAGATCAACAATCTCACACTCCTCAACAACAGAGTGGATGTGTAACACTGCCTTGTAACCAGCAGTGAAAATAGCCTGAAATATTACAAAGAGAAACACTACATCTTCAAAATTGTGTAGCAGTAATAAATAAATATATACTTGGAATGATGCAAATTGCTCATAATTCGTGTAAAAAAACAAATGGTGGCCAAAATATTAGACTATTAACCAGATACTATGGGACGTTAGATGTAGCATTGCTACTGGCATGAATGTATGAAATGTCATAAGCTTACATGCTGAACATAGAAGCCAATCCAATTTTCACTTAAATAAATCAATTCCATATTCATATGTATATATATCCCATAAGCATAAACGATAAATCCTCGTCAGTAAGTTGATACAGACTAGAAACGGAGAACACGATAAATATGAAAACTAGTCTCCTATAGCTTATTTATGCAATATCAAACAACACTTACATTATCAAGCAACTCTAGAATCTGCAGT
Reference sequence TTTTTCTTTGGGTCAGTACTTTCGCTTTCTTCATGTCAATTTCCTCTATGAGATCAACAATCTCACACTCCTCAACAACAGAGTGGATGTGTAACACTGCCTTGTAACCAGCAGTGAAAATAGCCTGAAATATTACAAAGAGAAACACTACATCTTCAAAATTGTGTAGCAGTAATAAATAAATATATACTTGGAATGATGCAAATTGCTCATAATTTGTGTAAAAAAACAAATGGTGGCCAAAATATTAGACTATTAACCAGATACTATGGGACGTTAGATGTAGCATTGCTACTGGCATGAATGTATGAAATGTCATAAGCTTACATGCTGAACATAGAAGCCAATCCAATTTTCACTTAAATAAATCAATTCCATATTCATATGTATATATATCCCATAAGCATAAACGATAAATCCTCGTCAGTAAGTTGATACAGACTAGAAACGGAGAACACGATAAATATGAAAACTAGTCTCCTATAGCTTATTTATGCAA
Type
EST
SNP
PCR primers
BE518440D_R1 ttgcataaataagctataggagactagBE442655-2D
PCR_primers
BE518440_cpF1 GGCAAACTACAACTGCACCA
BE518440D_R1 aatgtaagtgttgtttgatactttcag
Sequence
NSFT03P2_Contig10067
Linkage Group
2D
Source Species
Triticum aestivum
Data Source
You, Frank Mingan2010.01

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