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GrainGenes Probe Report: BE590865-5D

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Probe
BE590865-5D
Data at Wheat_SNP
BE590865-5D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP DEL at 354-362
SNP DEL;C>T at 266-274;343
Reference sequence CCCCCAGGACTTGAAGGGTAGACTCACTGTTCATTTCCAAGGAGAAGAAGGCATTGATGCCGGTGGACTCACAAGAGAGTGGTATCAGTTACTATCACGAGTGATTTTTGACAAGGGAGCCCTTCTATTCACGACTGTTGGAAATGACTTGACATTTCAACCAAACCCTAACTCTGTGTATCAGACTGAACACCTCTCATATTTCAAATTTGTTGGACGAGTGGTGAGTAAAGGATTATTGATATTATTATTATTACCAGCTACCACCACCACTACCACCACTACTAACAATTTTCTCTCCCTAGGTTGGAAAAGCGCTCTTTGATGCCCAACTTTTGGATGCCCATTTCACTAGATCTTTCTACAAGCACATACTTGGTGCCAAGGTTACTTACCATGATATTGAAGCCATTGGATCCTG
Reference sequence CATCACAGTCCTGTTAGAATTTCTGTCCGACGGGCGTACATTTTGGAAGACTCCTATAATCAGCTTAGGATGCGCTCACCCCAGGACTTGAAGGGTAGACTCACTGTTCATTTCCAAGGAGAAGAAGGCATTGATGCCGGTGGACTCACAAGAGAGTGGTATCAGTTACTATCACGAGTGATTTTTGACAAGGGAGCCCTTCTATTCACGACTGTTGGAAATGACTTGACATTTCAACCAAACCCTAACTCTGTGTATCAGACTGAACACCTCTCATATTTCAAATTTGTTGGACGAGTGGTGAGTAAAGGATTATTGATATTATTATTATTACCAGCTACCACCACCACTACCACCACTACTAACAATTTTCTCTCCCTAGGTTGGAAAAGCGCTCTTTGATGCCCAACTTTTGGATGTCCATTTCACTAGATCTTTCTACAAGCACATACTTGGTGCCAAGGTTACTTACCATGATATTGA
Type
EST
SNP
PCR primers
BE590865_cpR1 GCAGGATCAATGGCTTCAAT
BE590865D_F1 CGTACATTCTGGAAGACTCCTAT
Sequence
NSFT03P2_Contig16190
Linkage Group
5D
Source Species
Triticum aestivum
Data Source
You, Frank Mingan2010.01