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GrainGenes Probe Report: BF482960-4D

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BF482960-4D
Data at Wheat_SNP
BF482960-4D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
[ Hide all but 1 of 6 ]
SNP T>C;T>C;C>T;T>C at 629;731;833;884
SNP T>C;T>C;G>T;C>T at 758;860;904;962
SNP T>C at 884
SNP C>T;T>C at 833;884
Reference sequence GCATGTCAAGGGAAGTGCGTGACTTTCCCTTTCATACTAAAACTTAAGTAGCTTAACCTGAAACTTAAGTAGCTTAGAGGTGGTTTCTTTCGATTTTGCATTGTGTCATCTACTCCTCTCCAGGTTCTTGTTATCTCCTGCTTTGCAGTTGTAGCATATATCCAATCTTAGTTTTGGTTAGTACCAAAGAGGATATCAATGTACTGATGTGATTACTCCTGTTTTTGTCCTACATATTACACCTTTATGGAATGTCTTCCATTTTGCTCTAAACTCATTTGAGTGCATTCTAAATCCGCCTCTAACACTTCTTGGTGTCATTATGTTTAACCTCTCCACCATTTTGTTTCTTTGCAAAGATGTCAGAACTTCTCTGTGTGCATGTTATCTGTAGTAGTGGCAAGAACTAACTTGTGATTGAACATGTTTATTTGCTTATTTCTACCGTGAGATGAACCACATTTATGCATCTTACATCTCTATGTTGAATACTCAGGGGGATAGTCTGATGAGGATTCTAAGCGTTGCAGCATTTGCTGTTTCTGGTTATGCCTCTACGGATGGAAGGAGTTGTAAGCCCTTCAACCCTCTTCTTGGGGAGACCTATGAAGCAGATTATCCAGACAAAGGTCTTCGTTTTTTCTCAGAAAAGGTATGTTTATGAACCTTTAGAAATCCAGTAATATGAATAACAGGTTCCTACTGTTGGTTAGCATAGTCCACTGTTTATTCTCCTAACTTATTTCTTACATTCTGCTTGTGTAACTTAACACCTTAAACTTCTCCATGGACTAGTTTGAATCTTCTTTAAGAACAGCCTGCTGCAATACTGCTGCAGTGCTCCATGTAGTCGTTACTTTGGATTTTCTACTCCGTACCTATTGAATCACCAAATGGCCTTTCGTTTGTAGACTTAACAGATACTTGAGGCCCCTACAGATTTTCTTCAAGTTTAGTTTGTCTGCTTCTGCATGTTGATTTATATAAAAATATTCAATACCACTTGCCAGGTCAGTCATCATCCAATGGT
Reference sequence GTTATCTCCTGCTTTGCAGTTGTAGCATATATCCAATCTTAGTTTTGGTTAGTACCAAAGAGGATATCAATGTACTGATGTGATTACTCCTGTTTTTGTCCTACATATTACACCTTTATGGAATGTCTTCCATTTTGCTCTAAACTCATTTGAGTGCATTCTAAATCCGCCTCTAACACTTCTTGGTGTCATTATGTTTAACCTCTCCACCATTTTGTTTCTTTGCAAAGATGTCAGAACTTCTCTGTGTGCATGTTATCTGTAGTAGTGGCAAGAACTAACTTGTGATTGAACATGTTTATTTGCTTATTTCTACCGTGAGATGAACCACATTTATGCATCTTACATCTCTATGTTGAATACTCAGGGGGATAGTCTGATGAGGATTCTAAGCGTTGCAGCATTTGCTGTTTCTGGTTATGCCTCTACGGATGGAAGGAGTTGTAAGCCCTTCAACCCTCTTCTTGGGGAGACCTATGAAGCAGATTATCCAGACAAAGGTCTTCGTTTTTTCTCAGAAAAGGTATGTTTATGAACCTTTAGAAATCCAGTAATATGAATAACAGGTTCCTACTGTTGGTTAGCATAGTCCACTGTTTATTCTCCTAACTTATTTCTTACATTCTGCTTGTGTAACTTAACACCTTAAACTTCTCCATGGACTAGTTTGAATCTTCTTTAAGAACAGCCTGCTGCAATACTGCTGCAGTGCTCCATGTAGTCGTTACTTTGGATTTTCTACTCCGTACCTATTGAATCACCAAATGGCCTTTCTTTTGTAGACTTAACAGATACTTGAGGCCCCTACAGATTTTCTTCAAGTTTAGTTTGTCTGCTTCTGCATGTTGATTTATATAAAAATATTCAATACCACTTGCCAGGTTAGTCATCATCCAATG
Type
EST
SNP
PCR primers
BF482960_cpR1 CTATCTGCCCAAAACCTCCA
BF482960D_F1 GTGGTTTCTTTCGATTTTGCAT
Sequence
NSFT03P2_Contig2129
Linkage Group
4D
Source Species
Triticum aestivum
Data Source
You, Frank Mingan2010.01

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