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GrainGenes Probe Report: BF482977-3A

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Probe
BF482977-3A
Data at Wheat_SNP
BF482977-3A
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP DEL at 393
SNP G>T;C>T;DEL at 11;39;40
Reference sequence TTCTGCTGTAACAAAATAGACGAGGCCGTTGAAACTCAAAATAGGCGGAGGGGCGCTCTTTTGATAGAAAACACGGGCGTTCCTCTCGTTCCAAACTGTCGAACACAGAAGCATTGTGAGAGACGCCACAGCCTTCCTATTAGGGATGTTTATGGCTTTACGTCGGAGAGGTTGATCCGCCACTCCTCCTTGGCGGAGCGCTCCAAGTGCCACAAGGATTGGTCCCAAGATGAAGCCACTCATTGACTAAGTTCCAAAGCCGAAGCATGAAGCAGCATTTGAAGAAGAGATGCACGCCGGATTCATGCCCCTTTTGCAAAGAGCGCAAAGACCGCAATTTGACCATTCACATTTGGCCAAACGATCGGCGGCCCAAACCCTATCTTGAATAGCCAACCACGAGTCCTAAAGTAACAGAAACCTCTCTTACAATACAAACGAAACAATATTTATACTACATGCTCAACAGTGCCAACTGCCATGCAAATGACGGTTGCATCCATGTGGTATATCCTACTATCCATAACATTAGAAAGTCAAAAAGCAATAGAGGGATTGTGTACTAGATTACCAGAACCAGAACCAGATGCGTGTCTTATACATGTTGATGAAGATGAACTAATGCTATGAGAGGATTATTAGGGTTAGCTTCTTATTACATGTTTCTTGTATGTCCCAGATTGCAAACATGATTAGGTTTCTGGTGGATAGCTACAACAAGCCAATCCCTGCGATATTGGAAATTCCATCCAAGGACCATCCATAT
Reference sequence ATGCATATCTGTCTTTTCTCTTAAGGATCAGCAAATTGCATTTGTCAGAATCTTGCAAGTATATCACGTAAAGAAAGAGGGTGGTCATGAGTTATTGGGGTTAAATAGTCCTGATTAGTTTCTTTAGACTCACCTTCTGCTGTAAACAAAATAGATGAGGCCGTTGAAACTCAAAATAGGCGGAGGGGCGCTCTTTTGATAGAAAACATGGGCGTTCCTCTCGTTCCAAACTGTCAAACACAGAAGCATTGTGAGAGACGCCACAGCCTTCCTATTAGGGATGTTTATGGCTTTACGTCGGAGAGGTTGATCCGCCACTCCTCCTTGGCGGAGCGCTCCAAGTGCCACAAGGATTGGTCCCAAGATGAAGCCACTCATTGACTAAGTTCCAAAGCCGAAGCATGAAGCAGCATTTGAAGAAGAGATGCACGCCGGATTCATGCCCCTTTTGCAAAGAGCGCAAAGACCGCAATTTGACCATTCACATTTGGCCAAACGATCGGCGGCCCAAACCCTATCTTGAATAGCCAACCACGAGTCCTAAAGTAACAGAAACCTCTCTTACAATACAAACGAAACAATATTTATACTACATGCTCAACAGTGCCAACTGCCATGCAAATGACGGTTGCATCCATGTGGTATATCCTACTATCCATAACATTAGAAAGTCAAAAAGCAATAGAGGGATTGTGTACTAGATTACCAGAACCAGAACCAGATGCGTGTCTTATACATGTTGATGAAGATGAACTAATGCTATGAGAGGATTATTAGGGTTAGCTTCTTATTACATGTTTCTTGTATGTCCCAGATTGCAAACATGATTAGGTTTCTGGTGGATAGCTACAACAAGCCAATCCCTGCGATATTGGAAATTCCATCCAAGGACCATCCATATGATCCAGCGAGTGACTCGGTCCTTTCTCGTGTGAAATATC
Type
EST
SNP
PCR primers
BF482977A_F1 GGTCATGAGTTATTGGGGTTAAA
BF482977_cpR1 GCCTATCAGAAGCAACCGAG
Sequence
NSFT03P2_Contig17227
Linkage Group
3A
Source Species
Triticum aestivum
Data Source
You, Frank Mingan2010.01