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GrainGenes Probe Report: BG275102-4A

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BG275102-4A
Data at Wheat_SNP
BG275102-4A
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
[ Hide all but 1 of 6 ]
SNP A>G;T>C;T>C;G>C;A>T;A>T;C>T;T>A;G>C;A>G;T>G;INS;T>A;A>G;T>G at 35;41;42;43;44;45;46;64;85;114;185;293, 1;382;486;531
SNP T>A;DEL;C>T;C>T;C>T;T>G;G>T;C>T;C>G at 255;256-261;274;606;663;687;775;972;1232
SNP T>A;DEL;C>T;C>T;C>T;T>G;G>T;C>T;C>T;G>A;T>C;C>G at 255;256-261;274;606;663;687;775;796;972;1073;1103;1232
SNP T>A;DEL;C>T;C>T;C>T;T>G at 255;256-261;274;606;663;687
Reference sequence TTGTCACCCTTGTCACTATTATAACCTCCTCTGAAGTATCTTGAACTCGAGGGACGCTCTCGGTCCCTAAATGGAACCTTCTGAGAAAATGCAACGAACAGAATTGACAGCTTAGTATTCCCAGTTAAAATACTATCATGTTCGTAAAGCAACTATCACGTTCATAAAGAATCGCCTGATAAACTATATTGCCCTTGAGGCACAACCACACAAGTAGGGGCATAGAGCTACACATCACCCAGAATATCTTATATCCATGATATAAGCTCTTGAGTTTCCCATGCAGCAACAGATGACCAGTCACTCCAGTTAGCTGAGACTCCGTCAACCATATTGCCAACACCATGTGCACACTACACTTGGGGATACTGAAGTTGTTCCTACTTCCACTTTTGGAGGAAAATTACTACTTTCACTTAGCGATGAGTGATGACTAAAATTCACACCATTGTAGCGATCTAATATTTACGGGGTATTATAACCACATTAAGTACAAAGATAGATTGCTTAGTACAACAGAACCAGATCGGTGGCAACATTTGAGTTGATGGATTGCTAAGGAAACTTTCAAGAAGATGGTTCCAGTTACTACTTATTTTACTACTAATGCTTCTTGACTAGGCTTTACCGGTTACTACTAAGCATCCTGGAACCAGCCACTTGGTAACGGTACTCTCTGCCTGTTTCTGGGGTACAACTGCATTCA
Reference sequence GAGTTACTGCTGTTCCTCCGCACTATGGAGAGCATGCACCCAGATACCGTGGTGGAACAGGAACCTACTTGCCAAATCCTGTAAGCTCCTAATAATTCGTTCATTAGTCTTACCTTATTGCAAACATAACATGCTTATTCTTGGTATCTCAAAAAATAATATAGAAGAACGAGCTTTTGTAAATTTACTGGCTTTAGCAGTATAGTTTGATCAGCATCATCTTTCTGAAATGTAATATCATTTGTCCCAGCTTGTGATATGTCATACTCCCTCCGTTCCTAAATATAAGACCTTGTAGAGATTCCACTATAGACTACATACGGAGCAAAATGAGTGAATCTACACTCTAAAATATGACTACATACATCCGTATGTAGTTCATAGTGGAATCTCTAAAAGGTCTTATACTCCCTCCCACCGAGTTAGTGCTAGATACATCCATTTGAGGGACAAGCTTGGGACAAGTTTTTTCGGACAGAGGGAGTATTTAGGAACGGAGGGAGTAGGTTTTAAGTTGGTAGCCAGCTGCATTCCATATTACTCAAACGATCTAGTGGAAAGGGGCATGCTGTTATTGTCAAACAGAAACAGATGTATTTAGGTATCCTTTGAATTGGTACGGCCCAGATTTATACCGTCTATTGAGATCGGAAGCTCCACATCGGCATAGATGCTGAGAAACAGACTGTCTTGATCCATCCATTTATGACCCTACTGTGAGATTGTAACATTTATACTCCCTATGGAGGGAGTATATTTTATGGATGAATTTGTGTCATAGGTACAATTAAAAAACGGTAAATGTGTTTACCTGTAATATTCAAGAGAAGATATTCTTCAGCTTGTCATGAATGCAGTTTGTACCCCAGAAACAGGCAGAGAGTACCGTTACCAAGTGGCTGGTTCCAGGATGCTTAGTAGTAACCGGTAAAGCCTAGTCAAGAAGCATTAGTAGTAAAATAAGTAGTAACCGGAACCATCTTCTTGAAAGTTTCCTTAGCAATCCATCAACTCAAATGTTGCCACCGATCTGGTTCTGTTGTACTAAGCAATCTATCTTTGTACTTAATGTGGTTATAATACCCCGTAAATATTAGATCGCTACAATGGTGTGAATTTTAGTCATCACTCATCGCTAAGTGAAAGTAGTAATTTTCCTCCAAAAGTGGAAGTAGGAACAACTTCAGTATCCCCAAGTGTAGTGTGCACATGGTGTTGGCAATATGGTTGACGGAGTCTCAGCTAACTGGAGTGACTGGTCATCTGTTGCTGCATGGGAAACTCAAGA
Type
EST
SNP
PCR primers
BG275102A_R1 AAGCAACTATCACGTTCATAAAGAATC
BG275102_cpF1 CAACTGGACACAGATGGTGG
Sequence
NSFT03P2_Contig8758
Linkage Group
4A
Source Species
Triticum aestivum
Data Source
You, Frank Mingan2010.01

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