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GrainGenes Probe Report: CD373508-7D

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
CD373508-7D
Data at Wheat_SNP
CD373508-7D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
[ Hide all but 1 of 6 ]
SNP C>T;A>G at 557;558
SNP C>A;A>G at 218;558
SNP A>T at 177
SNP A>G at 558
Reference sequence CAAAACTTATAGGAGGAAATAAGGGCAGAAGAAAACTTGTCAATACCTGAGCATATGCATTGCCCTTGTTATATTCCGTGACACCATAGTTGTATGTCAACTCCAGAACAGTGGTCTTGTCCTCCTCAGCATAGCCCATCATGGCAATAGTGTACTGCACAAATCATAAACATGCCCAGTGTATCAAAATTTAGAGGACAAATGGCATCAAAACACACTTGTCATGTGATGTACTCCCTCCGTTCCCTAATATAAGACCTTTTAGTTATTTCTTGATTCGTATGTATCTAGACACATTTTAATATGTATGTTCACTCATTTTAGTATGTATGTAGTCAATATTTTGAAATAGCTAAAAGGTCTTATATTAGAGAACGGAGGGAGTATGTACCTTATACTGAGGCACATCCTTCTTCCTCAGAAGCTTCATCCCAAGGGCCTGCATAAAAGTCAAATGTTAGAATATCCCACATATAACTATTGTTCTAGAGAATATACAGAAAGGATATTGTCTCTAACATTTCAAACAACCTCCCATTTTACAAAAATACCTTCTCATAGAACATGATAGCCCGATCAAGGTCACCAACACGAAGCATAACTTGACAGAGAGGCTCAGGCGTCGGACCCCTCTG
Reference sequence AGAGGTGATTTTGGTGTTCAGCCCCGGCAGTGGCCCTGGCTGCCTTAGAATCTTTCCACCTAGTTCTTTGGTAACCAGCTCAACTGCTTCAGCGCTCTTGTACACATCGTCAGTGCCAATAGCAACCTGCACTTAGGCAACACATCATTAAGAAATGCCAAAACTTAAAGGAGGAAATAAGGGCAGAAGAAAACTTGTCAATACCTGAGCATATGCATTGCCCTTGTTATATTCCGTGACACCATAGTTGTATGTCAACTCCAGAACAGTGGTCTTGTCCTCCTCAGCATAGCCCATCATGGCAATAGTGTACTGCACAAATCATAAACATGCCCAGTGTATCAAAATTTAGAGGACAAATGGCATCAAAACACAATTGTCATGTGATGTACTCCCTCCGTTCCCTAATATAAGACCTTTTAGTTATTTCTTGATTCGTATGTATCTAGACACATTTTAATATGTATGTTCACTCATTTTAGTATGTATGTAGTCAATATTTTGAAATAGCTAAAAGGTCTTATATTAGAGAACGGAGGGAGTATGTACCTTATACTGAGGCACATCCTTCTTCCTCAGAAGCTTCATCCCAAGGGCCTGCATAAAAGTCAAATGTTAGAATATCCCACATATAACTATTGTTCTAGAGAATATACAGAAAGGATATTGTCTCTAACATTTCAAACAACCTCCCATTTTACAAAAATACCTTCTCGTAGAACATGATAGCCCGATCAAGGTCACCAACACGAAGCATAACTTGACAGAGAGGCTCAGGCGTCG
Type
EST
SNP
PCR primers
CD373508_cpR1 GAGCTTATCCAGAGGGGTCC
CD373508D_F2 CATTAAGAAATGCCAAAACTTATAG
Sequence
NSFT03P2_Contig18734
Linkage Group
7D
Source Species
Triticum aestivum
Data Source
You, Frank Mingan2010.01

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