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GrainGenes QTL Report: QCmp.fcu-2A

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QTL
QCmp.fcu-2A
Trait Affected
Spike density
Synonym
QTL1143_2A-Faris_et_al._2014c
Ontology
TO:0000612Planteomeseed density
CO_321:0000055Planteomewheat spike density trait
Trait Study
Spike compactness, Langdon x LDNIsA-2A, Faris2014c
Chromosome
2A
Positive Significant Marker
IWB8707
IWB7683
wmc181-2A
fcp651(Zeo)
LOD Peak Location
wmc181-2A
fcp651(Zeo)
Phenotypic R2
56
Species
Triticum turgidum ssp. durum
Triticum turgidum ssp. dicoccoides
Parent
LANGDON
LDN(ISA-2A)
Comment
Curator Note (VCB, 04/2019). QTL names and markers associated with this QTL are from two sources, the primary reference and information embedded in the QTL track of the GrainGenes genome browser for the Triticum turgidum ssp. durum cv. Svevo (RefSeq 1.0) assembly. QTL were initially curated by members of the International Durum Genome Sequencing Consortium who assigned the encoded QTL name and information on the assembly including computationally-aligned significant markers (SNPs, DArTs, SSRs). To curate this QTL for GrainGenes, the primary reference was reviewed, the original QTL name was synonymized, and original markers were added to the significant marker list shown on the QTL report page. GrainGenes users are advised to review the qtl track in the Svevo assembly for additional position information and confidence intervals, as well as the primary reference for additional statistics.
Reference
ReferenceFaris JD et al. (2014) Molecular and comparative mapping of genes governing spike compactness from wild emmer wheat. Molecular Genetics and Genomics 289:641-651.

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