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GrainGenes QTL Report: QGpc.StMo-2H.3

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QTL
QGpc.StMo-2H.3
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Trait Affected
Grain protein content
Ontology
TO:0000598Planteomeprotein content
CO_321:0000073Planteomewheat grain protein content trait
Trait Study
Protein content, Abdel-Haleem05
Map
Hordeum-OWB-OPA2008-2H
Hordeum-SxM-FeedQTL-2H
Map Data
Barley, SxM, Feed QTLs
Barley, OWB, OPA2008
Chromosome
2H
Nearest Marker
MWG557
Positive Significant Marker
Pcr1
ABA5
LOD Peak Height
11.8
LOD Threshold
3.2
Phenotypic R2
18.8
Effect of Allele Substitution
-0.457
Higher Scoring Allele from
Steptoe (barley)
Species
Hordeum vulgare
Parent
Morex (barley)
Steptoe (barley)
Comment
Other name = QGpc.msu-2H.2
Other name = Qpro2b
Pcr1, a significant marker for QGpc.StMo-2H.3, colocalizes with POPA2_0994 on the HarvEST integrated map. POPA2_0994 is 2.5 cM north of POPA2_0943 on Hordeum-OPA123-2008-2H
Trait at Barleyworld = Grain Protein
QTL analysis method = QTL-STAT, an interval mapping program using linear models to estimate QTL parameters (B.H. Liu and S.J.Knapp, unpub.). QTL assessed with single and multilocua ANOVAs
Environment
Bozeman 1992
Bozeman 2000
Reference
ReferenceSzucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140.
ReferenceBlake TK (2006) in preparation.
ReferenceHayes P et al. (1993) Quantitative trait locus effects and environmental interaction in a sample of North American barley germ plasm Theoretical and Applied Genetics 87:392-401.